Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04315 and H281DRAFT_04316 are separated by 157 nucleotides H281DRAFT_04316 and H281DRAFT_04317 are separated by 483 nucleotides
H281DRAFT_04315: H281DRAFT_04315 - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase, at 32,033 to 33,682
_04315
H281DRAFT_04316: H281DRAFT_04316 - bile acid:Na+ symporter, BASS family, at 33,840 to 34,799
_04316
H281DRAFT_04317: H281DRAFT_04317 - multidrug resistance protein, MATE family, at 35,283 to 36,695
_04317
Position (kb) 33
34
35 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 33.042 kb on + strand, within H281DRAFT_04315 at 33.151 kb on + strand, within H281DRAFT_04315 at 33.151 kb on + strand, within H281DRAFT_04315 at 33.151 kb on + strand, within H281DRAFT_04315 at 33.152 kb on - strand, within H281DRAFT_04315 at 33.310 kb on - strand, within H281DRAFT_04315 at 33.360 kb on + strand, within H281DRAFT_04315 at 33.360 kb on + strand, within H281DRAFT_04315 at 33.360 kb on + strand, within H281DRAFT_04315 at 33.360 kb on + strand, within H281DRAFT_04315 at 33.361 kb on - strand, within H281DRAFT_04315 at 33.363 kb on + strand, within H281DRAFT_04315 at 33.363 kb on + strand, within H281DRAFT_04315 at 33.364 kb on - strand, within H281DRAFT_04315 at 33.364 kb on - strand, within H281DRAFT_04315 at 33.640 kb on + strand at 33.641 kb on - strand at 33.759 kb on + strand at 33.759 kb on + strand at 33.760 kb on - strand at 33.880 kb on + strand at 33.881 kb on - strand at 33.991 kb on + strand, within H281DRAFT_04316 at 33.992 kb on - strand, within H281DRAFT_04316 at 33.992 kb on - strand, within H281DRAFT_04316 at 34.077 kb on + strand, within H281DRAFT_04316 at 34.078 kb on - strand, within H281DRAFT_04316 at 34.078 kb on - strand, within H281DRAFT_04316 at 34.078 kb on - strand, within H281DRAFT_04316 at 34.370 kb on - strand, within H281DRAFT_04316 at 34.379 kb on + strand, within H281DRAFT_04316 at 34.380 kb on - strand, within H281DRAFT_04316 at 34.380 kb on - strand, within H281DRAFT_04316 at 34.462 kb on + strand, within H281DRAFT_04316 at 34.463 kb on - strand, within H281DRAFT_04316 at 34.463 kb on - strand, within H281DRAFT_04316 at 34.585 kb on + strand, within H281DRAFT_04316 at 34.586 kb on - strand, within H281DRAFT_04316 at 34.739 kb on - strand at 34.817 kb on + strand at 34.817 kb on + strand at 34.817 kb on + strand at 34.825 kb on - strand at 34.825 kb on - strand at 34.826 kb on + strand at 34.941 kb on + strand at 34.942 kb on - strand at 35.123 kb on + strand at 35.337 kb on + strand at 35.338 kb on - strand at 35.338 kb on - strand at 35.338 kb on - strand at 35.338 kb on - strand at 35.404 kb on - strand at 35.404 kb on - strand at 35.441 kb on + strand, within H281DRAFT_04317 at 35.441 kb on + strand, within H281DRAFT_04317 at 35.442 kb on - strand, within H281DRAFT_04317 at 35.442 kb on - strand, within H281DRAFT_04317 at 35.442 kb on - strand, within H281DRAFT_04317 at 35.442 kb on - strand, within H281DRAFT_04317 at 35.442 kb on - strand, within H281DRAFT_04317 at 35.496 kb on + strand, within H281DRAFT_04317 at 35.496 kb on + strand, within H281DRAFT_04317 at 35.497 kb on - strand, within H281DRAFT_04317 at 35.600 kb on + strand, within H281DRAFT_04317 at 35.638 kb on + strand, within H281DRAFT_04317 at 35.638 kb on + strand, within H281DRAFT_04317 at 35.638 kb on + strand, within H281DRAFT_04317
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 33,042 + H281DRAFT_04315 0.61 -0.8 33,151 + H281DRAFT_04315 0.68 +0.2 33,151 + H281DRAFT_04315 0.68 -0.5 33,151 + H281DRAFT_04315 0.68 +0.2 33,152 - H281DRAFT_04315 0.68 +0.5 33,310 - H281DRAFT_04315 0.77 -0.6 33,360 + H281DRAFT_04315 0.80 +0.1 33,360 + H281DRAFT_04315 0.80 -0.2 33,360 + H281DRAFT_04315 0.80 +0.0 33,360 + H281DRAFT_04315 0.80 +0.2 33,361 - H281DRAFT_04315 0.80 +0.6 33,363 + H281DRAFT_04315 0.81 -0.9 33,363 + H281DRAFT_04315 0.81 -0.1 33,364 - H281DRAFT_04315 0.81 +0.1 33,364 - H281DRAFT_04315 0.81 +0.1 33,640 + +0.7 33,641 - +0.0 33,759 + +0.5 33,759 + -0.5 33,760 - +1.5 33,880 + +0.2 33,881 - +0.5 33,991 + H281DRAFT_04316 0.16 +2.5 33,992 - H281DRAFT_04316 0.16 +0.1 33,992 - H281DRAFT_04316 0.16 +0.3 34,077 + H281DRAFT_04316 0.25 -0.1 34,078 - H281DRAFT_04316 0.25 +1.2 34,078 - H281DRAFT_04316 0.25 -0.7 34,078 - H281DRAFT_04316 0.25 -0.3 34,370 - H281DRAFT_04316 0.55 -0.1 34,379 + H281DRAFT_04316 0.56 +1.3 34,380 - H281DRAFT_04316 0.56 +0.0 34,380 - H281DRAFT_04316 0.56 -2.8 34,462 + H281DRAFT_04316 0.65 +0.2 34,463 - H281DRAFT_04316 0.65 +0.0 34,463 - H281DRAFT_04316 0.65 +0.6 34,585 + H281DRAFT_04316 0.78 +0.7 34,586 - H281DRAFT_04316 0.78 +0.7 34,739 - +1.5 34,817 + -0.5 34,817 + -0.1 34,817 + -2.6 34,825 - +0.6 34,825 - -0.3 34,826 + +0.4 34,941 + -0.7 34,942 - -0.4 35,123 + +0.4 35,337 + +0.2 35,338 - +0.3 35,338 - -1.1 35,338 - +1.5 35,338 - +0.2 35,404 - +0.2 35,404 - -0.5 35,441 + H281DRAFT_04317 0.11 +0.5 35,441 + H281DRAFT_04317 0.11 +0.2 35,442 - H281DRAFT_04317 0.11 -0.1 35,442 - H281DRAFT_04317 0.11 +0.0 35,442 - H281DRAFT_04317 0.11 +0.7 35,442 - H281DRAFT_04317 0.11 -0.4 35,442 - H281DRAFT_04317 0.11 +0.9 35,496 + H281DRAFT_04317 0.15 +0.4 35,496 + H281DRAFT_04317 0.15 -0.8 35,497 - H281DRAFT_04317 0.15 -0.9 35,600 + H281DRAFT_04317 0.22 -2.2 35,638 + H281DRAFT_04317 0.25 -0.4 35,638 + H281DRAFT_04317 0.25 -0.1 35,638 + H281DRAFT_04317 0.25 -0.0
Or see this region's nucleotide sequence