Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04278 and H281DRAFT_04279 are separated by 289 nucleotides H281DRAFT_04279 and H281DRAFT_04280 are separated by 113 nucleotides
H281DRAFT_04278: H281DRAFT_04278 - 6-phosphogluconate dehydratase, at 396,890 to 398,815
_04278
H281DRAFT_04279: H281DRAFT_04279 - transcriptional regulator, RpiR family, at 399,105 to 399,950
_04279
H281DRAFT_04280: H281DRAFT_04280 - ADP-heptose:LPS heptosyltransferase, at 400,064 to 401,824
_04280
Position (kb) 399
400 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 398.164 kb on - strand, within H281DRAFT_04278 at 398.461 kb on + strand, within H281DRAFT_04278 at 398.461 kb on + strand, within H281DRAFT_04278 at 398.462 kb on - strand, within H281DRAFT_04278 at 398.586 kb on + strand, within H281DRAFT_04278 at 398.587 kb on - strand, within H281DRAFT_04278 at 398.587 kb on - strand, within H281DRAFT_04278 at 399.051 kb on + strand at 399.066 kb on + strand at 399.066 kb on + strand at 399.067 kb on - strand at 399.069 kb on - strand at 399.069 kb on - strand at 399.090 kb on - strand at 399.163 kb on + strand at 399.334 kb on + strand, within H281DRAFT_04279 at 399.334 kb on + strand, within H281DRAFT_04279 at 399.334 kb on + strand, within H281DRAFT_04279 at 399.395 kb on - strand, within H281DRAFT_04279 at 399.473 kb on - strand, within H281DRAFT_04279 at 399.569 kb on + strand, within H281DRAFT_04279 at 399.569 kb on + strand, within H281DRAFT_04279 at 399.570 kb on - strand, within H281DRAFT_04279 at 399.994 kb on + strand at 399.995 kb on - strand at 400.177 kb on - strand at 400.200 kb on + strand at 400.200 kb on + strand at 400.282 kb on + strand, within H281DRAFT_04280 at 400.282 kb on + strand, within H281DRAFT_04280 at 400.445 kb on + strand, within H281DRAFT_04280 at 400.552 kb on + strand, within H281DRAFT_04280 at 400.552 kb on + strand, within H281DRAFT_04280 at 400.553 kb on - strand, within H281DRAFT_04280 at 400.599 kb on + strand, within H281DRAFT_04280 at 400.600 kb on - strand, within H281DRAFT_04280 at 400.672 kb on - strand, within H281DRAFT_04280 at 400.767 kb on - strand, within H281DRAFT_04280
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 398,164 - H281DRAFT_04278 0.66 -1.1 398,461 + H281DRAFT_04278 0.82 -0.0 398,461 + H281DRAFT_04278 0.82 -0.7 398,462 - H281DRAFT_04278 0.82 +0.9 398,586 + H281DRAFT_04278 0.88 -0.0 398,587 - H281DRAFT_04278 0.88 -1.6 398,587 - H281DRAFT_04278 0.88 -1.8 399,051 + +0.4 399,066 + +1.4 399,066 + -0.4 399,067 - +0.9 399,069 - -0.3 399,069 - -1.0 399,090 - +0.2 399,163 + -0.3 399,334 + H281DRAFT_04279 0.27 +0.4 399,334 + H281DRAFT_04279 0.27 -1.2 399,334 + H281DRAFT_04279 0.27 -1.4 399,395 - H281DRAFT_04279 0.34 +0.5 399,473 - H281DRAFT_04279 0.43 -0.9 399,569 + H281DRAFT_04279 0.55 -1.4 399,569 + H281DRAFT_04279 0.55 -1.1 399,570 - H281DRAFT_04279 0.55 -3.4 399,994 + +0.2 399,995 - -0.2 400,177 - +0.4 400,200 + +1.0 400,200 + +0.2 400,282 + H281DRAFT_04280 0.12 -0.0 400,282 + H281DRAFT_04280 0.12 +1.6 400,445 + H281DRAFT_04280 0.22 -0.0 400,552 + H281DRAFT_04280 0.28 +0.6 400,552 + H281DRAFT_04280 0.28 -2.3 400,553 - H281DRAFT_04280 0.28 -0.9 400,599 + H281DRAFT_04280 0.30 -3.1 400,600 - H281DRAFT_04280 0.30 -1.1 400,672 - H281DRAFT_04280 0.35 +0.2 400,767 - H281DRAFT_04280 0.40 +0.2
Or see this region's nucleotide sequence