Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04193 and H281DRAFT_04194 are separated by 90 nucleotides H281DRAFT_04194 and H281DRAFT_04195 are separated by 329 nucleotides H281DRAFT_04195 and H281DRAFT_04196 are separated by 180 nucleotides H281DRAFT_04196 and H281DRAFT_04197 overlap by 23 nucleotides
H281DRAFT_04193: H281DRAFT_04193 - branched chain amino acid aminotransferase apoenzyme, at 312,760 to 313,683
_04193
H281DRAFT_04194: H281DRAFT_04194 - Uncharacterized conserved protein, contains Zn-finger domain, at 313,774 to 313,968
_04194
H281DRAFT_04195: H281DRAFT_04195 - heptosyltransferase-2, at 314,298 to 315,323
_04195
H281DRAFT_04196: H281DRAFT_04196 - SnoaL-like domain-containing protein, at 315,504 to 315,950
_04196
H281DRAFT_04197: H281DRAFT_04197 - hypothetical protein, at 315,928 to 317,103
_04197
Position (kb) 314
315
316 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 313.300 kb on + strand, within H281DRAFT_04193 at 313.333 kb on + strand, within H281DRAFT_04193 at 313.333 kb on + strand, within H281DRAFT_04193 at 313.387 kb on + strand at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.503 kb on + strand, within H281DRAFT_04193 at 313.657 kb on + strand at 313.657 kb on + strand at 313.681 kb on + strand at 313.682 kb on - strand at 313.757 kb on + strand at 313.758 kb on - strand at 313.930 kb on + strand, within H281DRAFT_04194 at 314.001 kb on + strand at 314.002 kb on - strand at 314.002 kb on - strand at 314.187 kb on + strand at 314.187 kb on + strand at 314.233 kb on + strand at 314.721 kb on + strand, within H281DRAFT_04195 at 314.721 kb on + strand, within H281DRAFT_04195 at 314.722 kb on - strand, within H281DRAFT_04195 at 314.860 kb on - strand, within H281DRAFT_04195 at 315.339 kb on + strand at 315.339 kb on + strand at 315.339 kb on + strand at 315.522 kb on - strand at 315.558 kb on + strand, within H281DRAFT_04196 at 315.559 kb on - strand, within H281DRAFT_04196 at 315.581 kb on + strand, within H281DRAFT_04196 at 315.582 kb on - strand, within H281DRAFT_04196 at 315.828 kb on + strand, within H281DRAFT_04196 at 315.828 kb on + strand, within H281DRAFT_04196 at 315.828 kb on + strand, within H281DRAFT_04196 at 315.829 kb on - strand, within H281DRAFT_04196 at 315.829 kb on - strand, within H281DRAFT_04196 at 315.829 kb on - strand, within H281DRAFT_04196 at 316.140 kb on + strand, within H281DRAFT_04197 at 316.200 kb on + strand, within H281DRAFT_04197
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 313,300 + H281DRAFT_04193 0.58 +0.5 313,333 + H281DRAFT_04193 0.62 +0.1 313,333 + H281DRAFT_04193 0.62 +0.1 313,387 + +3.3 313,501 + H281DRAFT_04193 0.80 -0.5 313,501 + H281DRAFT_04193 0.80 -0.3 313,501 + H281DRAFT_04193 0.80 -2.0 313,501 + H281DRAFT_04193 0.80 +0.1 313,501 + H281DRAFT_04193 0.80 -0.2 313,501 + H281DRAFT_04193 0.80 -0.6 313,501 + H281DRAFT_04193 0.80 -0.3 313,501 + H281DRAFT_04193 0.80 -0.5 313,503 + H281DRAFT_04193 0.80 +0.1 313,657 + +0.1 313,657 + +1.2 313,681 + -0.1 313,682 - +0.4 313,757 + -0.9 313,758 - +1.5 313,930 + H281DRAFT_04194 0.80 +0.3 314,001 + +1.0 314,002 - -2.3 314,002 - +0.9 314,187 + -0.2 314,187 + -0.2 314,233 + +0.2 314,721 + H281DRAFT_04195 0.41 +0.1 314,721 + H281DRAFT_04195 0.41 -2.1 314,722 - H281DRAFT_04195 0.41 -3.3 314,860 - H281DRAFT_04195 0.55 -3.9 315,339 + +0.4 315,339 + +0.6 315,339 + -1.8 315,522 - -0.4 315,558 + H281DRAFT_04196 0.12 -0.2 315,559 - H281DRAFT_04196 0.12 +1.0 315,581 + H281DRAFT_04196 0.17 -0.6 315,582 - H281DRAFT_04196 0.17 -0.6 315,828 + H281DRAFT_04196 0.72 +0.7 315,828 + H281DRAFT_04196 0.72 +0.1 315,828 + H281DRAFT_04196 0.72 -0.2 315,829 - H281DRAFT_04196 0.73 -0.5 315,829 - H281DRAFT_04196 0.73 +0.6 315,829 - H281DRAFT_04196 0.73 +0.0 316,140 + H281DRAFT_04197 0.18 +0.4 316,200 + H281DRAFT_04197 0.23 +0.3
Or see this region's nucleotide sequence