Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04082 and H281DRAFT_04083 overlap by 4 nucleotides H281DRAFT_04083 and H281DRAFT_04084 are separated by 549 nucleotides H281DRAFT_04084 and H281DRAFT_04085 are separated by 295 nucleotides
H281DRAFT_04082: H281DRAFT_04082 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 185,632 to 187,929
_04082
H281DRAFT_04083: H281DRAFT_04083 - ATP-dependent Clp protease adaptor protein ClpS, at 187,926 to 188,240
_04083
H281DRAFT_04084: H281DRAFT_04084 - cold-shock DNA-binding protein family, at 188,790 to 188,996
_04084
H281DRAFT_04085: H281DRAFT_04085 - isocitrate dehydrogenase (NADP), at 189,292 to 190,548
_04085
Position (kb) 188
189 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 188.018 kb on + strand, within H281DRAFT_04083 at 188.021 kb on - strand, within H281DRAFT_04083 at 188.021 kb on - strand, within H281DRAFT_04083 at 188.021 kb on - strand, within H281DRAFT_04083 at 188.063 kb on + strand, within H281DRAFT_04083 at 188.064 kb on - strand, within H281DRAFT_04083 at 188.064 kb on - strand, within H281DRAFT_04083 at 188.064 kb on - strand at 188.099 kb on - strand, within H281DRAFT_04083 at 188.099 kb on - strand, within H281DRAFT_04083 at 188.164 kb on + strand, within H281DRAFT_04083 at 188.164 kb on + strand, within H281DRAFT_04083 at 188.165 kb on - strand, within H281DRAFT_04083 at 188.165 kb on - strand, within H281DRAFT_04083 at 188.205 kb on + strand, within H281DRAFT_04083 at 188.206 kb on - strand, within H281DRAFT_04083 at 188.232 kb on - strand at 188.240 kb on + strand at 188.240 kb on + strand at 188.240 kb on + strand at 188.251 kb on + strand at 188.252 kb on - strand at 188.252 kb on - strand at 188.259 kb on + strand at 188.259 kb on + strand at 188.259 kb on + strand at 188.259 kb on + strand at 188.260 kb on - strand at 188.383 kb on - strand at 188.556 kb on - strand at 188.556 kb on - strand at 188.556 kb on - strand at 188.603 kb on - strand at 188.636 kb on - strand at 188.774 kb on + strand at 188.775 kb on - strand at 189.089 kb on + strand at 189.090 kb on - strand at 189.188 kb on + strand at 189.293 kb on + strand at 189.293 kb on + strand at 189.294 kb on - strand at 189.371 kb on + strand at 189.444 kb on + strand, within H281DRAFT_04085 at 189.494 kb on + strand, within H281DRAFT_04085 at 189.494 kb on + strand, within H281DRAFT_04085 at 189.495 kb on - strand, within H281DRAFT_04085 at 189.509 kb on + strand, within H281DRAFT_04085 at 189.510 kb on - strand, within H281DRAFT_04085 at 189.561 kb on + strand, within H281DRAFT_04085 at 189.562 kb on - strand, within H281DRAFT_04085 at 189.620 kb on + strand, within H281DRAFT_04085 at 189.620 kb on + strand, within H281DRAFT_04085 at 189.621 kb on - strand, within H281DRAFT_04085 at 189.656 kb on + strand, within H281DRAFT_04085 at 189.656 kb on + strand, within H281DRAFT_04085 at 189.657 kb on - strand, within H281DRAFT_04085 at 189.813 kb on - strand, within H281DRAFT_04085 at 189.836 kb on + strand, within H281DRAFT_04085 at 189.951 kb on + strand, within H281DRAFT_04085
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 188,018 + H281DRAFT_04083 0.29 -3.1 188,021 - H281DRAFT_04083 0.30 -1.8 188,021 - H281DRAFT_04083 0.30 -0.3 188,021 - H281DRAFT_04083 0.30 -1.6 188,063 + H281DRAFT_04083 0.43 -4.2 188,064 - H281DRAFT_04083 0.44 -0.0 188,064 - H281DRAFT_04083 0.44 -0.3 188,064 - -1.4 188,099 - H281DRAFT_04083 0.55 -1.0 188,099 - H281DRAFT_04083 0.55 +0.1 188,164 + H281DRAFT_04083 0.76 -3.5 188,164 + H281DRAFT_04083 0.76 -3.4 188,165 - H281DRAFT_04083 0.76 -0.5 188,165 - H281DRAFT_04083 0.76 -0.5 188,205 + H281DRAFT_04083 0.89 -1.6 188,206 - H281DRAFT_04083 0.89 +0.2 188,232 - +0.2 188,240 + -3.2 188,240 + -3.3 188,240 + -2.8 188,251 + -3.2 188,252 - -0.5 188,252 - -1.1 188,259 + -3.7 188,259 + -2.7 188,259 + -3.2 188,259 + -3.6 188,260 - -1.4 188,383 - +0.6 188,556 - +0.5 188,556 - +0.2 188,556 - +0.4 188,603 - +0.2 188,636 - -0.1 188,774 + -0.5 188,775 - +0.0 189,089 + -0.8 189,090 - -0.3 189,188 + +0.5 189,293 + +1.0 189,293 + -0.3 189,294 - -2.2 189,371 + -0.4 189,444 + H281DRAFT_04085 0.12 +0.4 189,494 + H281DRAFT_04085 0.16 +1.0 189,494 + H281DRAFT_04085 0.16 +0.5 189,495 - H281DRAFT_04085 0.16 -1.0 189,509 + H281DRAFT_04085 0.17 +0.6 189,510 - H281DRAFT_04085 0.17 +0.7 189,561 + H281DRAFT_04085 0.21 +1.0 189,562 - H281DRAFT_04085 0.21 +0.5 189,620 + H281DRAFT_04085 0.26 -0.1 189,620 + H281DRAFT_04085 0.26 -0.7 189,621 - H281DRAFT_04085 0.26 -0.4 189,656 + H281DRAFT_04085 0.29 -0.1 189,656 + H281DRAFT_04085 0.29 +0.0 189,657 - H281DRAFT_04085 0.29 -0.2 189,813 - H281DRAFT_04085 0.41 +0.3 189,836 + H281DRAFT_04085 0.43 -0.6 189,951 + H281DRAFT_04085 0.52 -0.6
Or see this region's nucleotide sequence