Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03959 and H281DRAFT_03960 are separated by 124 nucleotides H281DRAFT_03960 and H281DRAFT_03961 are separated by 410 nucleotides
H281DRAFT_03959: H281DRAFT_03959 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 62,204 to 63,583
_03959
H281DRAFT_03960: H281DRAFT_03960 - disulfide bond formation protein DsbB, at 63,708 to 64,217
_03960
H281DRAFT_03961: H281DRAFT_03961 - xanthine dehydrogenase, small subunit (EC 1.17.1.4) <small>(from data)</small>, at 64,628 to 66,256
_03961
Position (kb) 63
64
65 Strain fitness (log2 ratio) -2
-1
0
1
2 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 63.149 kb on + strand, within H281DRAFT_03959 at 63.149 kb on + strand, within H281DRAFT_03959 at 63.150 kb on - strand, within H281DRAFT_03959 at 63.192 kb on - strand, within H281DRAFT_03959 at 63.192 kb on - strand, within H281DRAFT_03959 at 63.192 kb on - strand, within H281DRAFT_03959 at 63.637 kb on + strand at 63.687 kb on + strand at 63.688 kb on - strand at 64.233 kb on + strand at 64.251 kb on + strand at 64.251 kb on + strand at 64.306 kb on + strand at 64.307 kb on - strand at 64.592 kb on - strand at 64.607 kb on + strand at 64.613 kb on + strand at 64.637 kb on + strand at 64.638 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 62,993 + H281DRAFT_03959 0.57 +0.6 62,993 + H281DRAFT_03959 0.57 +0.3 62,993 + H281DRAFT_03959 0.57 -2.3 62,993 + H281DRAFT_03959 0.57 +0.1 62,994 - H281DRAFT_03959 0.57 +0.6 62,994 - H281DRAFT_03959 0.57 +1.5 62,994 - H281DRAFT_03959 0.57 +0.4 63,149 + H281DRAFT_03959 0.68 +0.4 63,149 + H281DRAFT_03959 0.68 -1.4 63,150 - H281DRAFT_03959 0.69 -0.5 63,192 - H281DRAFT_03959 0.72 -0.7 63,192 - H281DRAFT_03959 0.72 -1.2 63,192 - H281DRAFT_03959 0.72 -2.3 63,637 + +0.6 63,687 + +1.9 63,688 - +0.9 64,233 + -1.9 64,251 + +0.5 64,251 + +1.0 64,306 + +0.1 64,307 - +0.5 64,592 - +0.6 64,607 + +0.7 64,613 + +0.6 64,637 + +1.2 64,638 - -0.5
Or see this region's nucleotide sequence