Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03957 and H281DRAFT_03958 are separated by 159 nucleotides H281DRAFT_03958 and H281DRAFT_03959 are separated by 62 nucleotides
H281DRAFT_03957: H281DRAFT_03957 - D-galactonate transporter, at 59,952 to 61,301
_03957
H281DRAFT_03958: H281DRAFT_03958 - DNA-binding transcriptional regulator, GntR family, at 61,461 to 62,141
_03958
H281DRAFT_03959: H281DRAFT_03959 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 62,204 to 63,583
_03959
Position (kb) 61
62
63 Strain fitness (log2 ratio) -2
-1
0
1 at 60.632 kb on - strand, within H281DRAFT_03957 at 60.689 kb on + strand, within H281DRAFT_03957 at 60.689 kb on + strand, within H281DRAFT_03957 at 60.689 kb on + strand, within H281DRAFT_03957 at 60.689 kb on + strand, within H281DRAFT_03957 at 60.741 kb on + strand, within H281DRAFT_03957 at 60.741 kb on + strand, within H281DRAFT_03957 at 60.741 kb on + strand, within H281DRAFT_03957 at 60.742 kb on - strand, within H281DRAFT_03957 at 60.924 kb on + strand, within H281DRAFT_03957 at 61.020 kb on + strand, within H281DRAFT_03957 at 61.020 kb on + strand, within H281DRAFT_03957 at 61.020 kb on + strand, within H281DRAFT_03957 at 61.021 kb on - strand, within H281DRAFT_03957 at 61.021 kb on - strand, within H281DRAFT_03957 at 61.137 kb on + strand, within H281DRAFT_03957 at 61.150 kb on - strand, within H281DRAFT_03957 at 61.153 kb on + strand, within H281DRAFT_03957 at 61.153 kb on + strand, within H281DRAFT_03957 at 61.305 kb on - strand at 61.310 kb on + strand at 61.310 kb on + strand at 61.310 kb on + strand at 61.311 kb on - strand at 61.311 kb on - strand at 61.311 kb on - strand at 61.424 kb on + strand at 61.424 kb on + strand at 61.424 kb on + strand at 61.771 kb on - strand, within H281DRAFT_03958 at 61.771 kb on - strand, within H281DRAFT_03958 at 61.771 kb on - strand, within H281DRAFT_03958 at 61.812 kb on + strand, within H281DRAFT_03958 at 61.813 kb on - strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.871 kb on - strand, within H281DRAFT_03958 at 61.871 kb on - strand, within H281DRAFT_03958 at 62.102 kb on + strand at 62.152 kb on + strand at 62.152 kb on + strand at 62.162 kb on - strand at 62.165 kb on + strand at 62.165 kb on + strand at 62.166 kb on - strand at 62.415 kb on + strand, within H281DRAFT_03959 at 62.415 kb on + strand, within H281DRAFT_03959 at 62.415 kb on + strand, within H281DRAFT_03959 at 62.416 kb on - strand, within H281DRAFT_03959 at 62.552 kb on - strand, within H281DRAFT_03959 at 62.587 kb on + strand, within H281DRAFT_03959 at 62.588 kb on - strand, within H281DRAFT_03959 at 62.664 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 60,632 - H281DRAFT_03957 0.50 +1.3 60,689 + H281DRAFT_03957 0.55 +0.1 60,689 + H281DRAFT_03957 0.55 +1.2 60,689 + H281DRAFT_03957 0.55 -1.0 60,689 + H281DRAFT_03957 0.55 +0.1 60,741 + H281DRAFT_03957 0.58 -1.4 60,741 + H281DRAFT_03957 0.58 +0.2 60,741 + H281DRAFT_03957 0.58 -1.0 60,742 - H281DRAFT_03957 0.59 +1.0 60,924 + H281DRAFT_03957 0.72 +0.4 61,020 + H281DRAFT_03957 0.79 +0.3 61,020 + H281DRAFT_03957 0.79 +0.6 61,020 + H281DRAFT_03957 0.79 -1.6 61,021 - H281DRAFT_03957 0.79 +0.0 61,021 - H281DRAFT_03957 0.79 +0.1 61,137 + H281DRAFT_03957 0.88 +0.4 61,150 - H281DRAFT_03957 0.89 +0.4 61,153 + H281DRAFT_03957 0.89 +0.5 61,153 + H281DRAFT_03957 0.89 +0.2 61,305 - -0.1 61,310 + -0.4 61,310 + -0.9 61,310 + -0.3 61,311 - -0.4 61,311 - -0.5 61,311 - -1.0 61,424 + -1.2 61,424 + -0.2 61,424 + -0.0 61,771 - H281DRAFT_03958 0.46 -0.9 61,771 - H281DRAFT_03958 0.46 +0.0 61,771 - H281DRAFT_03958 0.46 -0.8 61,812 + H281DRAFT_03958 0.52 -1.6 61,813 - H281DRAFT_03958 0.52 -0.5 61,870 + H281DRAFT_03958 0.60 +0.1 61,870 + H281DRAFT_03958 0.60 -0.8 61,870 + H281DRAFT_03958 0.60 +0.2 61,870 + H281DRAFT_03958 0.60 -1.6 61,870 + H281DRAFT_03958 0.60 -0.9 61,871 - H281DRAFT_03958 0.60 +0.7 61,871 - H281DRAFT_03958 0.60 -1.1 62,102 + +0.3 62,152 + -1.4 62,152 + +0.5 62,162 - -0.7 62,165 + +0.4 62,165 + +0.2 62,166 - -0.3 62,415 + H281DRAFT_03959 0.15 -0.1 62,415 + H281DRAFT_03959 0.15 -0.0 62,415 + H281DRAFT_03959 0.15 +0.4 62,416 - H281DRAFT_03959 0.15 +0.4 62,552 - H281DRAFT_03959 0.25 -0.4 62,587 + H281DRAFT_03959 0.28 -0.7 62,588 - H281DRAFT_03959 0.28 -0.8 62,664 + H281DRAFT_03959 0.33 -0.2 62,993 + H281DRAFT_03959 0.57 +0.6 62,993 + H281DRAFT_03959 0.57 +0.3 62,993 + H281DRAFT_03959 0.57 -2.3 62,993 + H281DRAFT_03959 0.57 +0.1 62,994 - H281DRAFT_03959 0.57 +0.6 62,994 - H281DRAFT_03959 0.57 +1.5 62,994 - H281DRAFT_03959 0.57 +0.4
Or see this region's nucleotide sequence