Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03888 and H281DRAFT_03889 are separated by 4 nucleotides H281DRAFT_03889 and H281DRAFT_03890 are separated by 193 nucleotides
H281DRAFT_03888: H281DRAFT_03888 - His Kinase A (phospho-acceptor) domain-containing protein, at 418,717 to 420,375
_03888
H281DRAFT_03889: H281DRAFT_03889 - circadian clock protein KaiC, at 420,380 to 421,897
_03889
H281DRAFT_03890: H281DRAFT_03890 - Broad specificity phosphatase PhoE, at 422,091 to 422,681
_03890
Position (kb) 420
421
422 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 419.516 kb on + strand, within H281DRAFT_03888 at 419.516 kb on + strand, within H281DRAFT_03888 at 419.517 kb on - strand, within H281DRAFT_03888 at 419.523 kb on + strand, within H281DRAFT_03888 at 419.607 kb on + strand, within H281DRAFT_03888 at 419.892 kb on + strand, within H281DRAFT_03888 at 420.065 kb on - strand, within H281DRAFT_03888 at 420.667 kb on + strand, within H281DRAFT_03889 at 420.753 kb on + strand, within H281DRAFT_03889 at 420.754 kb on - strand, within H281DRAFT_03889 at 420.780 kb on + strand, within H281DRAFT_03889 at 420.807 kb on + strand, within H281DRAFT_03889 at 420.807 kb on + strand, within H281DRAFT_03889 at 420.807 kb on + strand, within H281DRAFT_03889 at 420.808 kb on - strand, within H281DRAFT_03889 at 420.915 kb on + strand, within H281DRAFT_03889 at 420.916 kb on - strand, within H281DRAFT_03889 at 420.984 kb on + strand, within H281DRAFT_03889 at 420.984 kb on + strand, within H281DRAFT_03889 at 420.984 kb on + strand, within H281DRAFT_03889 at 420.984 kb on + strand, within H281DRAFT_03889 at 420.984 kb on + strand, within H281DRAFT_03889 at 420.985 kb on - strand, within H281DRAFT_03889 at 420.985 kb on - strand, within H281DRAFT_03889 at 420.987 kb on + strand, within H281DRAFT_03889 at 420.988 kb on - strand, within H281DRAFT_03889 at 420.988 kb on - strand, within H281DRAFT_03889 at 421.339 kb on + strand, within H281DRAFT_03889 at 421.369 kb on + strand, within H281DRAFT_03889 at 421.369 kb on + strand, within H281DRAFT_03889 at 421.668 kb on - strand, within H281DRAFT_03889 at 421.702 kb on + strand, within H281DRAFT_03889 at 421.702 kb on + strand, within H281DRAFT_03889 at 421.702 kb on + strand, within H281DRAFT_03889 at 421.703 kb on - strand, within H281DRAFT_03889 at 421.703 kb on - strand, within H281DRAFT_03889 at 421.703 kb on - strand, within H281DRAFT_03889 at 421.703 kb on - strand, within H281DRAFT_03889 at 421.707 kb on + strand, within H281DRAFT_03889 at 421.708 kb on - strand, within H281DRAFT_03889 at 421.768 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.798 kb on - strand at 421.897 kb on + strand at 421.898 kb on - strand at 421.908 kb on + strand at 421.908 kb on + strand at 421.908 kb on + strand at 421.908 kb on + strand at 421.909 kb on - strand at 421.909 kb on - strand at 421.909 kb on - strand at 421.918 kb on + strand at 422.030 kb on + strand at 422.030 kb on + strand at 422.030 kb on + strand at 422.067 kb on + strand at 422.067 kb on + strand at 422.068 kb on - strand at 422.292 kb on + strand, within H281DRAFT_03890 at 422.293 kb on - strand, within H281DRAFT_03890 at 422.723 kb on - strand at 422.740 kb on - strand at 422.747 kb on - strand at 422.747 kb on - strand at 422.806 kb on + strand at 422.806 kb on + strand at 422.806 kb on + strand at 422.806 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 419,516 + H281DRAFT_03888 0.48 -0.2 419,516 + H281DRAFT_03888 0.48 +0.6 419,517 - H281DRAFT_03888 0.48 -0.9 419,523 + H281DRAFT_03888 0.49 +0.8 419,607 + H281DRAFT_03888 0.54 +0.2 419,892 + H281DRAFT_03888 0.71 -0.3 420,065 - H281DRAFT_03888 0.81 +0.6 420,667 + H281DRAFT_03889 0.19 +0.0 420,753 + H281DRAFT_03889 0.25 +1.2 420,754 - H281DRAFT_03889 0.25 -0.1 420,780 + H281DRAFT_03889 0.26 -0.4 420,807 + H281DRAFT_03889 0.28 -1.5 420,807 + H281DRAFT_03889 0.28 -0.6 420,807 + H281DRAFT_03889 0.28 -0.1 420,808 - H281DRAFT_03889 0.28 -0.9 420,915 + H281DRAFT_03889 0.35 +0.6 420,916 - H281DRAFT_03889 0.35 -0.7 420,984 + H281DRAFT_03889 0.40 -0.8 420,984 + H281DRAFT_03889 0.40 -0.3 420,984 + H281DRAFT_03889 0.40 +0.3 420,984 + H281DRAFT_03889 0.40 +0.2 420,984 + H281DRAFT_03889 0.40 +0.0 420,985 - H281DRAFT_03889 0.40 -0.6 420,985 - H281DRAFT_03889 0.40 +0.0 420,987 + H281DRAFT_03889 0.40 +0.9 420,988 - H281DRAFT_03889 0.40 +0.3 420,988 - H281DRAFT_03889 0.40 -0.7 421,339 + H281DRAFT_03889 0.63 -1.2 421,369 + H281DRAFT_03889 0.65 +0.4 421,369 + H281DRAFT_03889 0.65 -0.1 421,668 - H281DRAFT_03889 0.85 -1.0 421,702 + H281DRAFT_03889 0.87 -0.0 421,702 + H281DRAFT_03889 0.87 -0.6 421,702 + H281DRAFT_03889 0.87 +0.8 421,703 - H281DRAFT_03889 0.87 -0.6 421,703 - H281DRAFT_03889 0.87 -0.4 421,703 - H281DRAFT_03889 0.87 +0.1 421,703 - H281DRAFT_03889 0.87 +0.8 421,707 + H281DRAFT_03889 0.87 -0.1 421,708 - H281DRAFT_03889 0.87 -1.2 421,768 + +0.4 421,797 + +0.0 421,797 + +0.1 421,797 + -0.2 421,797 + -5.2 421,797 + +0.3 421,798 - +0.1 421,897 + +0.2 421,898 - +0.4 421,908 + -1.7 421,908 + +0.0 421,908 + -1.6 421,908 + -0.8 421,909 - +0.7 421,909 - +0.2 421,909 - +0.4 421,918 + +0.7 422,030 + +0.4 422,030 + -0.2 422,030 + -0.3 422,067 + +1.4 422,067 + +0.2 422,068 - -0.1 422,292 + H281DRAFT_03890 0.34 -1.4 422,293 - H281DRAFT_03890 0.34 +0.7 422,723 - +0.4 422,740 - +1.1 422,747 - -1.3 422,747 - -1.9 422,806 + +0.4 422,806 + -0.2 422,806 + -0.0 422,806 + -0.1
Or see this region's nucleotide sequence