Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03880 and H281DRAFT_03881 are separated by 14 nucleotides H281DRAFT_03881 and H281DRAFT_03882 are separated by 26 nucleotides H281DRAFT_03882 and H281DRAFT_03883 are separated by 103 nucleotides H281DRAFT_03883 and H281DRAFT_03884 overlap by 4 nucleotides
H281DRAFT_03880: H281DRAFT_03880 - isoquinoline 1-oxidoreductase, beta subunit, at 410,223 to 412,490
_03880
H281DRAFT_03881: H281DRAFT_03881 - isoquinoline 1-oxidoreductase, alpha subunit, at 412,505 to 412,963
_03881
H281DRAFT_03882: H281DRAFT_03882 - hypothetical protein, at 412,990 to 413,082
_03882
H281DRAFT_03883: H281DRAFT_03883 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 413,186 to 414,778
_03883
H281DRAFT_03884: H281DRAFT_03884 - RND family efflux transporter, MFP subunit, at 414,775 to 415,791
_03884
H281DRAFT_03885: H281DRAFT_03885 - Protein of unknown function (DUF1656), at 415,739 to 415,948
_03885
Position (kb) 413
414
415 Strain fitness (log2 ratio) -2
-1
0
1
2 at 412.703 kb on - strand, within H281DRAFT_03881 at 412.893 kb on + strand, within H281DRAFT_03881 at 412.893 kb on + strand, within H281DRAFT_03881 at 412.894 kb on - strand, within H281DRAFT_03881 at 412.894 kb on - strand, within H281DRAFT_03881 at 413.083 kb on - strand at 413.119 kb on + strand at 413.119 kb on + strand at 413.120 kb on - strand at 413.168 kb on + strand at 413.369 kb on + strand, within H281DRAFT_03883 at 413.370 kb on - strand, within H281DRAFT_03883 at 413.493 kb on + strand, within H281DRAFT_03883 at 413.770 kb on + strand, within H281DRAFT_03883 at 413.989 kb on + strand, within H281DRAFT_03883 at 413.990 kb on - strand, within H281DRAFT_03883 at 414.060 kb on - strand, within H281DRAFT_03883 at 414.502 kb on - strand, within H281DRAFT_03883 at 415.484 kb on + strand, within H281DRAFT_03884 at 415.543 kb on + strand, within H281DRAFT_03884 at 415.637 kb on + strand, within H281DRAFT_03884 at 415.638 kb on - strand, within H281DRAFT_03884 at 415.638 kb on - strand, within H281DRAFT_03884 at 415.641 kb on - strand, within H281DRAFT_03884
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 412,703 - H281DRAFT_03881 0.43 -0.6 412,893 + H281DRAFT_03881 0.85 +1.4 412,893 + H281DRAFT_03881 0.85 +0.7 412,894 - H281DRAFT_03881 0.85 +0.7 412,894 - H281DRAFT_03881 0.85 +2.0 413,083 - -0.9 413,119 + +0.4 413,119 + -0.0 413,120 - +0.0 413,168 + -0.7 413,369 + H281DRAFT_03883 0.11 -0.4 413,370 - H281DRAFT_03883 0.12 +0.7 413,493 + H281DRAFT_03883 0.19 -1.2 413,770 + H281DRAFT_03883 0.37 +1.0 413,989 + H281DRAFT_03883 0.50 +1.6 413,990 - H281DRAFT_03883 0.50 +1.2 414,060 - H281DRAFT_03883 0.55 +1.7 414,502 - H281DRAFT_03883 0.83 +2.2 415,484 + H281DRAFT_03884 0.70 +0.7 415,543 + H281DRAFT_03884 0.76 -1.8 415,637 + H281DRAFT_03884 0.85 -0.6 415,638 - H281DRAFT_03884 0.85 +1.0 415,638 - H281DRAFT_03884 0.85 -1.3 415,641 - H281DRAFT_03884 0.85 +0.1
Or see this region's nucleotide sequence