Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03869 and H281DRAFT_03870 are separated by 142 nucleotides H281DRAFT_03870 and H281DRAFT_03871 are separated by 398 nucleotides H281DRAFT_03871 and H281DRAFT_03872 are separated by 44 nucleotides H281DRAFT_03872 and H281DRAFT_03873 are separated by 127 nucleotides
H281DRAFT_03869: H281DRAFT_03869 - hypothetical protein, at 398,053 to 398,502
_03869
H281DRAFT_03870: H281DRAFT_03870 - hypothetical protein, at 398,645 to 398,878
_03870
H281DRAFT_03871: H281DRAFT_03871 - hypothetical protein, at 399,277 to 400,998
_03871
H281DRAFT_03872: H281DRAFT_03872 - hypothetical protein, at 401,043 to 401,423
_03872
H281DRAFT_03873: H281DRAFT_03873 - protein of unknown function (DUF4148), at 401,551 to 401,844
_03873
Position (kb) 399
400
401 Strain fitness (log2 ratio) -2
-1
0
1
2 at 398.296 kb on + strand, within H281DRAFT_03869 at 398.314 kb on - strand, within H281DRAFT_03869 at 398.382 kb on + strand, within H281DRAFT_03869 at 398.402 kb on + strand, within H281DRAFT_03869 at 398.403 kb on - strand, within H281DRAFT_03869 at 398.590 kb on - strand at 398.612 kb on + strand at 398.612 kb on + strand at 398.613 kb on - strand at 398.809 kb on + strand, within H281DRAFT_03870 at 398.809 kb on + strand, within H281DRAFT_03870 at 398.809 kb on + strand, within H281DRAFT_03870 at 398.809 kb on + strand, within H281DRAFT_03870 at 398.810 kb on - strand, within H281DRAFT_03870 at 398.916 kb on - strand at 398.916 kb on - strand at 398.916 kb on - strand at 399.221 kb on + strand at 399.276 kb on + strand at 399.292 kb on + strand at 399.293 kb on - strand at 399.403 kb on - strand at 399.512 kb on - strand, within H281DRAFT_03871 at 399.541 kb on + strand, within H281DRAFT_03871 at 399.541 kb on + strand, within H281DRAFT_03871 at 399.688 kb on + strand, within H281DRAFT_03871 at 399.852 kb on + strand, within H281DRAFT_03871 at 400.049 kb on - strand, within H281DRAFT_03871 at 400.090 kb on + strand, within H281DRAFT_03871 at 400.148 kb on - strand, within H281DRAFT_03871 at 400.148 kb on - strand, within H281DRAFT_03871 at 400.344 kb on + strand, within H281DRAFT_03871 at 400.345 kb on - strand, within H281DRAFT_03871 at 400.382 kb on - strand, within H281DRAFT_03871 at 400.525 kb on + strand, within H281DRAFT_03871 at 400.525 kb on + strand, within H281DRAFT_03871 at 400.525 kb on + strand, within H281DRAFT_03871 at 400.633 kb on + strand, within H281DRAFT_03871 at 400.648 kb on + strand, within H281DRAFT_03871 at 400.648 kb on + strand, within H281DRAFT_03871 at 400.868 kb on - strand at 400.868 kb on - strand at 400.951 kb on + strand at 400.951 kb on + strand at 400.951 kb on + strand at 400.951 kb on + strand at 400.952 kb on - strand at 400.999 kb on + strand at 401.000 kb on - strand at 401.319 kb on + strand, within H281DRAFT_03872 at 401.319 kb on + strand, within H281DRAFT_03872 at 401.320 kb on - strand, within H281DRAFT_03872 at 401.323 kb on + strand, within H281DRAFT_03872 at 401.324 kb on - strand, within H281DRAFT_03872 at 401.452 kb on + strand at 401.481 kb on + strand at 401.482 kb on - strand at 401.616 kb on + strand, within H281DRAFT_03873 at 401.712 kb on - strand, within H281DRAFT_03873 at 401.949 kb on - strand at 401.949 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 398,296 + H281DRAFT_03869 0.54 +2.2 398,314 - H281DRAFT_03869 0.58 +1.4 398,382 + H281DRAFT_03869 0.73 +1.2 398,402 + H281DRAFT_03869 0.78 +0.1 398,403 - H281DRAFT_03869 0.78 -2.0 398,590 - +0.1 398,612 + +0.5 398,612 + -0.3 398,613 - +0.2 398,809 + H281DRAFT_03870 0.70 +0.0 398,809 + H281DRAFT_03870 0.70 -0.1 398,809 + H281DRAFT_03870 0.70 +1.2 398,809 + H281DRAFT_03870 0.70 -2.4 398,810 - H281DRAFT_03870 0.71 -1.1 398,916 - +0.1 398,916 - -0.2 398,916 - +0.2 399,221 + +1.0 399,276 + -1.6 399,292 + +1.6 399,293 - -0.5 399,403 - +0.6 399,512 - H281DRAFT_03871 0.14 -0.3 399,541 + H281DRAFT_03871 0.15 -0.8 399,541 + H281DRAFT_03871 0.15 -1.6 399,688 + H281DRAFT_03871 0.24 +0.2 399,852 + H281DRAFT_03871 0.33 +2.0 400,049 - H281DRAFT_03871 0.45 -0.3 400,090 + H281DRAFT_03871 0.47 +0.2 400,148 - H281DRAFT_03871 0.51 -1.3 400,148 - H281DRAFT_03871 0.51 +0.2 400,344 + H281DRAFT_03871 0.62 +1.1 400,345 - H281DRAFT_03871 0.62 -0.5 400,382 - H281DRAFT_03871 0.64 -1.3 400,525 + H281DRAFT_03871 0.72 +0.6 400,525 + H281DRAFT_03871 0.72 -0.6 400,525 + H281DRAFT_03871 0.72 -0.7 400,633 + H281DRAFT_03871 0.79 -0.4 400,648 + H281DRAFT_03871 0.80 -1.2 400,648 + H281DRAFT_03871 0.80 -0.9 400,868 - -0.1 400,868 - -0.0 400,951 + -2.7 400,951 + -0.6 400,951 + +1.0 400,951 + +0.4 400,952 - +0.5 400,999 + -0.2 401,000 - +0.1 401,319 + H281DRAFT_03872 0.72 +1.0 401,319 + H281DRAFT_03872 0.72 -0.1 401,320 - H281DRAFT_03872 0.73 -2.0 401,323 + H281DRAFT_03872 0.73 -0.9 401,324 - H281DRAFT_03872 0.74 -1.2 401,452 + +0.9 401,481 + +1.2 401,482 - +0.1 401,616 + H281DRAFT_03873 0.22 +0.3 401,712 - H281DRAFT_03873 0.55 -1.3 401,949 - +0.2 401,949 - +0.4
Or see this region's nucleotide sequence