Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03868 and H281DRAFT_03869 are separated by 381 nucleotides H281DRAFT_03869 and H281DRAFT_03870 are separated by 142 nucleotides H281DRAFT_03870 and H281DRAFT_03871 are separated by 398 nucleotides
H281DRAFT_03868: H281DRAFT_03868 - transcriptional regulator, XRE family with cupin sensor, at 397,027 to 397,671
_03868
H281DRAFT_03869: H281DRAFT_03869 - hypothetical protein, at 398,053 to 398,502
_03869
H281DRAFT_03870: H281DRAFT_03870 - hypothetical protein, at 398,645 to 398,878
_03870
H281DRAFT_03871: H281DRAFT_03871 - hypothetical protein, at 399,277 to 400,998
_03871
Position (kb) 398
399 Strain fitness (log2 ratio) -2
-1
0
1
2 at 397.164 kb on - strand, within H281DRAFT_03868 at 397.199 kb on + strand, within H281DRAFT_03868 at 397.200 kb on - strand, within H281DRAFT_03868 at 397.693 kb on + strand at 397.694 kb on - strand at 397.825 kb on - strand at 398.030 kb on + strand at 398.030 kb on + strand at 398.088 kb on + strand at 398.143 kb on + strand, within H281DRAFT_03869 at 398.296 kb on + strand, within H281DRAFT_03869 at 398.314 kb on - strand, within H281DRAFT_03869 at 398.382 kb on + strand, within H281DRAFT_03869 at 398.402 kb on + strand, within H281DRAFT_03869 at 398.403 kb on - strand, within H281DRAFT_03869 at 398.590 kb on - strand at 398.612 kb on + strand at 398.612 kb on + strand at 398.613 kb on - strand at 398.809 kb on + strand, within H281DRAFT_03870 at 398.809 kb on + strand, within H281DRAFT_03870 at 398.809 kb on + strand, within H281DRAFT_03870 at 398.809 kb on + strand, within H281DRAFT_03870 at 398.810 kb on - strand, within H281DRAFT_03870 at 398.916 kb on - strand at 398.916 kb on - strand at 398.916 kb on - strand at 399.221 kb on + strand at 399.276 kb on + strand at 399.292 kb on + strand at 399.293 kb on - strand at 399.403 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 397,164 - H281DRAFT_03868 0.21 +0.9 397,199 + H281DRAFT_03868 0.27 -0.8 397,200 - H281DRAFT_03868 0.27 +1.0 397,693 + +0.6 397,694 - +0.9 397,825 - -0.7 398,030 + +0.3 398,030 + +0.4 398,088 + -1.5 398,143 + H281DRAFT_03869 0.20 +0.1 398,296 + H281DRAFT_03869 0.54 +2.2 398,314 - H281DRAFT_03869 0.58 +1.4 398,382 + H281DRAFT_03869 0.73 +1.2 398,402 + H281DRAFT_03869 0.78 +0.1 398,403 - H281DRAFT_03869 0.78 -2.0 398,590 - +0.1 398,612 + +0.5 398,612 + -0.3 398,613 - +0.2 398,809 + H281DRAFT_03870 0.70 +0.0 398,809 + H281DRAFT_03870 0.70 -0.1 398,809 + H281DRAFT_03870 0.70 +1.2 398,809 + H281DRAFT_03870 0.70 -2.4 398,810 - H281DRAFT_03870 0.71 -1.1 398,916 - +0.1 398,916 - -0.2 398,916 - +0.2 399,221 + +1.0 399,276 + -1.6 399,292 + +1.6 399,293 - -0.5 399,403 - +0.6
Or see this region's nucleotide sequence