Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03862 and H281DRAFT_03863 are separated by 809 nucleotides H281DRAFT_03863 and H281DRAFT_03864 are separated by 144 nucleotides H281DRAFT_03864 and H281DRAFT_03865 are separated by 3 nucleotides
H281DRAFT_03862: H281DRAFT_03862 - Threonine/homoserine/homoserine lactone efflux protein, at 390,950 to 391,639
_03862
H281DRAFT_03863: H281DRAFT_03863 - D-alanyl-D-alanine carboxypeptidase, at 392,449 to 393,111
_03863
H281DRAFT_03864: H281DRAFT_03864 - protocatechuate 3,4-dioxygenase, alpha subunit, at 393,256 to 393,843
_03864
H281DRAFT_03865: H281DRAFT_03865 - protocatechuate 3,4-dioxygenase, beta subunit, at 393,847 to 394,551
_03865
Position (kb) 392
393
394 Strain fitness (log2 ratio) -2
-1
0
1 at 391.539 kb on - strand, within H281DRAFT_03862 at 391.609 kb on - strand at 391.609 kb on - strand at 391.634 kb on + strand at 391.634 kb on + strand at 391.669 kb on - strand at 391.679 kb on + strand at 391.680 kb on - strand at 391.752 kb on + strand at 391.752 kb on + strand at 391.753 kb on - strand at 391.753 kb on - strand at 391.804 kb on - strand at 391.844 kb on + strand at 391.845 kb on - strand at 391.941 kb on + strand at 391.942 kb on - strand at 391.975 kb on + strand at 391.978 kb on - strand at 391.978 kb on - strand at 391.986 kb on - strand at 392.283 kb on - strand at 392.375 kb on + strand at 392.900 kb on - strand, within H281DRAFT_03863 at 393.259 kb on + strand at 393.260 kb on - strand at 393.260 kb on - strand at 393.260 kb on - strand at 393.295 kb on - strand at 393.296 kb on + strand at 393.296 kb on + strand at 393.296 kb on + strand at 393.297 kb on - strand at 393.311 kb on + strand at 393.423 kb on - strand at 393.423 kb on - strand, within H281DRAFT_03864 at 393.475 kb on + strand, within H281DRAFT_03864 at 393.702 kb on + strand, within H281DRAFT_03864 at 393.703 kb on - strand, within H281DRAFT_03864 at 393.771 kb on - strand, within H281DRAFT_03864 at 393.849 kb on - strand at 394.022 kb on + strand, within H281DRAFT_03865 at 394.022 kb on + strand, within H281DRAFT_03865 at 394.023 kb on - strand, within H281DRAFT_03865 at 394.023 kb on - strand, within H281DRAFT_03865
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 391,539 - H281DRAFT_03862 0.85 +0.3 391,609 - +0.3 391,609 - +1.0 391,634 + -1.0 391,634 + -2.0 391,669 - +0.4 391,679 + -0.6 391,680 - -0.3 391,752 + -0.2 391,752 + +0.9 391,753 - -1.2 391,753 - +0.3 391,804 - -1.0 391,844 + +1.6 391,845 - -0.4 391,941 + +0.8 391,942 - +0.2 391,975 + -0.3 391,978 - -0.1 391,978 - +0.5 391,986 - -0.7 392,283 - +0.5 392,375 + +0.7 392,900 - H281DRAFT_03863 0.68 +1.2 393,259 + -0.9 393,260 - +0.3 393,260 - +0.6 393,260 - +0.5 393,295 - +0.4 393,296 + -0.2 393,296 + -0.1 393,296 + +0.0 393,297 - -1.8 393,311 + +0.4 393,423 - +0.0 393,423 - H281DRAFT_03864 0.28 +0.3 393,475 + H281DRAFT_03864 0.37 -0.5 393,702 + H281DRAFT_03864 0.76 -1.1 393,703 - H281DRAFT_03864 0.76 +0.8 393,771 - H281DRAFT_03864 0.88 -0.1 393,849 - -0.9 394,022 + H281DRAFT_03865 0.25 -0.5 394,022 + H281DRAFT_03865 0.25 -0.5 394,023 - H281DRAFT_03865 0.25 +0.2 394,023 - H281DRAFT_03865 0.25 +0.7
Or see this region's nucleotide sequence