Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03859 and H281DRAFT_03860 are separated by 581 nucleotides H281DRAFT_03860 and H281DRAFT_03861 are separated by 289 nucleotides H281DRAFT_03861 and H281DRAFT_03862 are separated by 307 nucleotides
H281DRAFT_03859: H281DRAFT_03859 - hypothetical protein, at 388,480 to 389,343
_03859
H281DRAFT_03860: H281DRAFT_03860 - hypothetical protein, at 389,925 to 390,149
_03860
H281DRAFT_03861: H281DRAFT_03861 - cold-shock DNA-binding protein family, at 390,439 to 390,642
_03861
H281DRAFT_03862: H281DRAFT_03862 - Threonine/homoserine/homoserine lactone efflux protein, at 390,950 to 391,639
_03862
Position (kb) 389
390
391 Strain fitness (log2 ratio) -2
-1
0
1 at 389.317 kb on + strand at 389.318 kb on - strand at 389.318 kb on - strand at 389.350 kb on - strand at 389.353 kb on + strand at 389.353 kb on + strand at 389.400 kb on - strand at 389.553 kb on + strand at 389.554 kb on - strand at 389.669 kb on - strand at 389.692 kb on + strand at 389.692 kb on + strand at 389.692 kb on + strand at 389.753 kb on + strand at 389.753 kb on + strand at 389.753 kb on + strand at 389.753 kb on + strand at 389.754 kb on - strand at 389.754 kb on - strand at 389.754 kb on - strand at 389.777 kb on - strand at 389.829 kb on + strand at 389.829 kb on + strand at 389.830 kb on - strand at 389.830 kb on - strand at 389.830 kb on - strand at 389.836 kb on - strand at 389.916 kb on - strand at 390.020 kb on - strand, within H281DRAFT_03860 at 390.077 kb on + strand, within H281DRAFT_03860 at 390.078 kb on - strand, within H281DRAFT_03860 at 390.125 kb on - strand, within H281DRAFT_03860 at 390.153 kb on - strand at 390.159 kb on + strand at 390.261 kb on - strand at 390.440 kb on + strand at 390.440 kb on + strand at 390.441 kb on - strand at 390.441 kb on - strand at 390.441 kb on - strand at 390.624 kb on + strand at 390.624 kb on + strand at 390.625 kb on - strand at 390.826 kb on - strand at 391.047 kb on + strand, within H281DRAFT_03862 at 391.048 kb on - strand, within H281DRAFT_03862 at 391.048 kb on - strand, within H281DRAFT_03862 at 391.096 kb on - strand, within H281DRAFT_03862 at 391.096 kb on - strand, within H281DRAFT_03862 at 391.140 kb on + strand, within H281DRAFT_03862 at 391.140 kb on + strand, within H281DRAFT_03862
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 389,317 + +0.2 389,318 - -0.3 389,318 - +0.6 389,350 - -0.4 389,353 + +0.6 389,353 + +0.9 389,400 - -0.3 389,553 + -0.4 389,554 - +0.6 389,669 - -1.3 389,692 + +0.1 389,692 + -1.2 389,692 + -0.6 389,753 + +0.3 389,753 + -0.9 389,753 + +0.4 389,753 + -2.1 389,754 - -0.4 389,754 - +0.3 389,754 - -0.5 389,777 - +0.2 389,829 + -0.1 389,829 + -0.6 389,830 - -0.5 389,830 - +1.0 389,830 - -0.5 389,836 - +0.4 389,916 - -1.6 390,020 - H281DRAFT_03860 0.42 +0.4 390,077 + H281DRAFT_03860 0.68 -0.2 390,078 - H281DRAFT_03860 0.68 +0.9 390,125 - H281DRAFT_03860 0.89 +0.1 390,153 - -0.3 390,159 + +0.6 390,261 - +1.0 390,440 + -0.2 390,440 + +0.5 390,441 - -0.7 390,441 - -0.3 390,441 - +1.0 390,624 + +0.7 390,624 + -0.3 390,625 - +0.2 390,826 - +1.0 391,047 + H281DRAFT_03862 0.14 -0.1 391,048 - H281DRAFT_03862 0.14 -0.6 391,048 - H281DRAFT_03862 0.14 +0.2 391,096 - H281DRAFT_03862 0.21 +0.4 391,096 - H281DRAFT_03862 0.21 -0.2 391,140 + H281DRAFT_03862 0.28 +0.4 391,140 + H281DRAFT_03862 0.28 +0.8
Or see this region's nucleotide sequence