Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03857 and H281DRAFT_03858 are separated by 216 nucleotides H281DRAFT_03858 and H281DRAFT_03859 are separated by 219 nucleotides
H281DRAFT_03857: H281DRAFT_03857 - MFS transporter, ACS family, D-galactonate transporter, at 385,813 to 387,129
_03857
H281DRAFT_03858: H281DRAFT_03858 - DNA-binding transcriptional regulator, LysR family, at 387,346 to 388,260
_03858
H281DRAFT_03859: H281DRAFT_03859 - hypothetical protein, at 388,480 to 389,343
_03859
Position (kb) 387
388
389 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 386.436 kb on + strand, within H281DRAFT_03857 at 386.600 kb on + strand, within H281DRAFT_03857 at 386.600 kb on + strand, within H281DRAFT_03857 at 386.667 kb on - strand, within H281DRAFT_03857 at 386.709 kb on + strand, within H281DRAFT_03857 at 386.709 kb on + strand, within H281DRAFT_03857 at 386.909 kb on + strand, within H281DRAFT_03857 at 386.909 kb on + strand, within H281DRAFT_03857 at 387.014 kb on + strand at 387.015 kb on - strand at 387.049 kb on + strand at 387.050 kb on - strand at 387.254 kb on + strand at 387.255 kb on - strand at 387.281 kb on + strand at 387.282 kb on - strand at 387.304 kb on + strand at 387.318 kb on + strand at 387.374 kb on + strand at 387.427 kb on + strand at 387.427 kb on + strand at 387.427 kb on + strand at 387.450 kb on + strand, within H281DRAFT_03858 at 387.566 kb on - strand, within H281DRAFT_03858 at 387.622 kb on - strand, within H281DRAFT_03858 at 387.989 kb on + strand, within H281DRAFT_03858 at 387.990 kb on - strand, within H281DRAFT_03858 at 388.106 kb on + strand, within H281DRAFT_03858 at 388.106 kb on + strand, within H281DRAFT_03858 at 388.107 kb on - strand, within H281DRAFT_03858 at 388.190 kb on + strand at 388.207 kb on - strand at 388.207 kb on - strand at 388.233 kb on + strand at 388.343 kb on + strand at 388.343 kb on + strand at 388.371 kb on - strand at 388.472 kb on + strand at 388.539 kb on - strand at 388.556 kb on + strand at 388.556 kb on + strand at 388.557 kb on - strand at 388.878 kb on - strand, within H281DRAFT_03859 at 388.878 kb on - strand, within H281DRAFT_03859 at 388.907 kb on + strand, within H281DRAFT_03859 at 388.907 kb on + strand, within H281DRAFT_03859 at 388.908 kb on - strand, within H281DRAFT_03859
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 386,436 + H281DRAFT_03857 0.47 -1.0 386,600 + H281DRAFT_03857 0.60 +0.4 386,600 + H281DRAFT_03857 0.60 +0.6 386,667 - H281DRAFT_03857 0.65 -0.4 386,709 + H281DRAFT_03857 0.68 -0.3 386,709 + H281DRAFT_03857 0.68 -0.7 386,909 + H281DRAFT_03857 0.83 -2.1 386,909 + H281DRAFT_03857 0.83 +0.8 387,014 + -0.6 387,015 - +1.8 387,049 + -0.8 387,050 - +0.8 387,254 + -0.7 387,255 - +0.7 387,281 + +2.2 387,282 - +0.3 387,304 + +3.4 387,318 + +0.0 387,374 + +1.0 387,427 + +1.6 387,427 + -0.0 387,427 + -0.2 387,450 + H281DRAFT_03858 0.11 +1.6 387,566 - H281DRAFT_03858 0.24 -0.1 387,622 - H281DRAFT_03858 0.30 +1.1 387,989 + H281DRAFT_03858 0.70 -2.1 387,990 - H281DRAFT_03858 0.70 +0.1 388,106 + H281DRAFT_03858 0.83 +0.4 388,106 + H281DRAFT_03858 0.83 -1.6 388,107 - H281DRAFT_03858 0.83 +0.3 388,190 + -1.0 388,207 - +0.4 388,207 - +0.0 388,233 + -1.0 388,343 + -0.8 388,343 + +0.8 388,371 - -1.6 388,472 + -0.8 388,539 - +0.0 388,556 + -0.1 388,556 + -1.6 388,557 - -0.5 388,878 - H281DRAFT_03859 0.46 +0.6 388,878 - H281DRAFT_03859 0.46 +1.1 388,907 + H281DRAFT_03859 0.49 -0.2 388,907 + H281DRAFT_03859 0.49 +0.9 388,908 - H281DRAFT_03859 0.50 +0.5
Or see this region's nucleotide sequence