Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03855 and H281DRAFT_03856 overlap by 4 nucleotides H281DRAFT_03856 and H281DRAFT_03857 are separated by 32 nucleotides H281DRAFT_03857 and H281DRAFT_03858 are separated by 216 nucleotides
H281DRAFT_03855: H281DRAFT_03855 - Sugar phosphate isomerase/epimerase, at 384,195 to 385,043
_03855
H281DRAFT_03856: H281DRAFT_03856 - 3-oxoacyl-[acyl-carrier protein] reductase, at 385,040 to 385,780
_03856
H281DRAFT_03857: H281DRAFT_03857 - MFS transporter, ACS family, D-galactonate transporter, at 385,813 to 387,129
_03857
H281DRAFT_03858: H281DRAFT_03858 - DNA-binding transcriptional regulator, LysR family, at 387,346 to 388,260
_03858
Position (kb) 385
386
387
388 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 384.846 kb on + strand, within H281DRAFT_03855 at 384.846 kb on + strand, within H281DRAFT_03855 at 384.847 kb on - strand, within H281DRAFT_03855 at 385.076 kb on - strand at 385.076 kb on - strand at 385.299 kb on - strand, within H281DRAFT_03856 at 385.429 kb on - strand, within H281DRAFT_03856 at 385.482 kb on + strand, within H281DRAFT_03856 at 385.781 kb on - strand at 385.825 kb on - strand at 386.128 kb on + strand, within H281DRAFT_03857 at 386.129 kb on - strand, within H281DRAFT_03857 at 386.315 kb on + strand, within H281DRAFT_03857 at 386.436 kb on + strand, within H281DRAFT_03857 at 386.600 kb on + strand, within H281DRAFT_03857 at 386.600 kb on + strand, within H281DRAFT_03857 at 386.667 kb on - strand, within H281DRAFT_03857 at 386.709 kb on + strand, within H281DRAFT_03857 at 386.709 kb on + strand, within H281DRAFT_03857 at 386.909 kb on + strand, within H281DRAFT_03857 at 386.909 kb on + strand, within H281DRAFT_03857 at 387.014 kb on + strand at 387.015 kb on - strand at 387.049 kb on + strand at 387.050 kb on - strand at 387.254 kb on + strand at 387.255 kb on - strand at 387.281 kb on + strand at 387.282 kb on - strand at 387.304 kb on + strand at 387.318 kb on + strand at 387.374 kb on + strand at 387.427 kb on + strand at 387.427 kb on + strand at 387.427 kb on + strand at 387.450 kb on + strand, within H281DRAFT_03858 at 387.566 kb on - strand, within H281DRAFT_03858 at 387.622 kb on - strand, within H281DRAFT_03858 at 387.989 kb on + strand, within H281DRAFT_03858 at 387.990 kb on - strand, within H281DRAFT_03858 at 388.106 kb on + strand, within H281DRAFT_03858 at 388.106 kb on + strand, within H281DRAFT_03858 at 388.107 kb on - strand, within H281DRAFT_03858
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 384,846 + H281DRAFT_03855 0.77 +0.1 384,846 + H281DRAFT_03855 0.77 +0.9 384,847 - H281DRAFT_03855 0.77 -0.4 385,076 - +0.0 385,076 - +0.3 385,299 - H281DRAFT_03856 0.35 -0.1 385,429 - H281DRAFT_03856 0.52 +1.0 385,482 + H281DRAFT_03856 0.60 -0.2 385,781 - -1.2 385,825 - +0.4 386,128 + H281DRAFT_03857 0.24 -0.7 386,129 - H281DRAFT_03857 0.24 -0.2 386,315 + H281DRAFT_03857 0.38 +0.6 386,436 + H281DRAFT_03857 0.47 -1.0 386,600 + H281DRAFT_03857 0.60 +0.4 386,600 + H281DRAFT_03857 0.60 +0.6 386,667 - H281DRAFT_03857 0.65 -0.4 386,709 + H281DRAFT_03857 0.68 -0.3 386,709 + H281DRAFT_03857 0.68 -0.7 386,909 + H281DRAFT_03857 0.83 -2.1 386,909 + H281DRAFT_03857 0.83 +0.8 387,014 + -0.6 387,015 - +1.8 387,049 + -0.8 387,050 - +0.8 387,254 + -0.7 387,255 - +0.7 387,281 + +2.2 387,282 - +0.3 387,304 + +3.4 387,318 + +0.0 387,374 + +1.0 387,427 + +1.6 387,427 + -0.0 387,427 + -0.2 387,450 + H281DRAFT_03858 0.11 +1.6 387,566 - H281DRAFT_03858 0.24 -0.1 387,622 - H281DRAFT_03858 0.30 +1.1 387,989 + H281DRAFT_03858 0.70 -2.1 387,990 - H281DRAFT_03858 0.70 +0.1 388,106 + H281DRAFT_03858 0.83 +0.4 388,106 + H281DRAFT_03858 0.83 -1.6 388,107 - H281DRAFT_03858 0.83 +0.3
Or see this region's nucleotide sequence