Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03831 and H281DRAFT_03832 are separated by 63 nucleotides H281DRAFT_03832 and H281DRAFT_03834 are separated by 361 nucleotides H281DRAFT_03834 and H281DRAFT_03835 are separated by 33 nucleotides H281DRAFT_03835 and H281DRAFT_03836 overlap by 4 nucleotides
H281DRAFT_03831: H281DRAFT_03831 - heat shock protein Hsp20, at 360,010 to 360,579
_03831
H281DRAFT_03832: H281DRAFT_03832 - tRNA_Lys_TTT, at 360,643 to 360,718
_03832
H281DRAFT_03834: H281DRAFT_03834 - NitT/TauT family transport system substrate-binding protein, at 361,080 to 362,150
_03834
H281DRAFT_03835: H281DRAFT_03835 - NitT/TauT family transport system permease protein, at 362,184 to 362,999
_03835
H281DRAFT_03836: H281DRAFT_03836 - NitT/TauT family transport system ATP-binding protein, at 362,996 to 363,787
_03836
Position (kb) 361
362
363 Strain fitness (log2 ratio) -1
0
1 at 360.290 kb on + strand, within H281DRAFT_03831 at 360.366 kb on - strand, within H281DRAFT_03831 at 360.609 kb on + strand at 360.715 kb on - strand at 361.257 kb on + strand, within H281DRAFT_03834 at 362.157 kb on + strand at 362.230 kb on + strand at 362.231 kb on - strand at 362.266 kb on - strand, within H281DRAFT_03835 at 362.878 kb on + strand, within H281DRAFT_03835 at 362.879 kb on - strand, within H281DRAFT_03835 at 362.902 kb on - strand, within H281DRAFT_03835
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 360,290 + H281DRAFT_03831 0.49 -0.6 360,366 - H281DRAFT_03831 0.62 +0.5 360,609 + -0.1 360,715 - +0.4 361,257 + H281DRAFT_03834 0.17 -1.0 362,157 + -0.6 362,230 + +0.2 362,231 - -1.3 362,266 - H281DRAFT_03835 0.10 -1.0 362,878 + H281DRAFT_03835 0.85 +1.3 362,879 - H281DRAFT_03835 0.85 +1.0 362,902 - H281DRAFT_03835 0.88 -0.6
Or see this region's nucleotide sequence