Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03825 and H281DRAFT_03826 are separated by 65 nucleotides H281DRAFT_03826 and H281DRAFT_03827 are separated by 166 nucleotides
H281DRAFT_03825: H281DRAFT_03825 - diguanylate cyclase (GGDEF) domain-containing protein, at 352,272 to 353,465
_03825
H281DRAFT_03826: H281DRAFT_03826 - uronate dehydrogenase, at 353,531 to 354,382
_03826
H281DRAFT_03827: H281DRAFT_03827 - transcriptional regulator, LacI family, at 354,549 to 355,541
_03827
Position (kb) 353
354
355 Strain fitness (log2 ratio) -2
-1
0
1
2 at 352.587 kb on + strand, within H281DRAFT_03825 at 352.588 kb on - strand, within H281DRAFT_03825 at 352.650 kb on + strand, within H281DRAFT_03825 at 352.650 kb on + strand, within H281DRAFT_03825 at 353.070 kb on - strand, within H281DRAFT_03825 at 353.188 kb on + strand, within H281DRAFT_03825 at 353.460 kb on + strand at 353.460 kb on + strand at 353.734 kb on - strand, within H281DRAFT_03826 at 353.868 kb on - strand, within H281DRAFT_03826 at 354.035 kb on + strand, within H281DRAFT_03826 at 354.060 kb on + strand at 354.069 kb on + strand, within H281DRAFT_03826 at 354.069 kb on + strand, within H281DRAFT_03826 at 354.402 kb on - strand at 354.406 kb on + strand at 354.410 kb on + strand at 354.410 kb on + strand at 354.410 kb on + strand at 354.411 kb on - strand at 354.414 kb on + strand at 354.496 kb on - strand at 354.622 kb on - strand at 354.829 kb on - strand, within H281DRAFT_03827 at 354.998 kb on + strand, within H281DRAFT_03827 at 354.998 kb on + strand, within H281DRAFT_03827 at 354.999 kb on - strand, within H281DRAFT_03827 at 354.999 kb on - strand, within H281DRAFT_03827 at 355.044 kb on + strand, within H281DRAFT_03827 at 355.044 kb on + strand, within H281DRAFT_03827 at 355.066 kb on + strand, within H281DRAFT_03827 at 355.066 kb on + strand, within H281DRAFT_03827 at 355.371 kb on + strand, within H281DRAFT_03827
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 352,587 + H281DRAFT_03825 0.26 +0.1 352,588 - H281DRAFT_03825 0.26 -1.8 352,650 + H281DRAFT_03825 0.32 -1.0 352,650 + H281DRAFT_03825 0.32 +0.6 353,070 - H281DRAFT_03825 0.67 +1.5 353,188 + H281DRAFT_03825 0.77 -0.1 353,460 + -0.7 353,460 + -0.3 353,734 - H281DRAFT_03826 0.24 +0.0 353,868 - H281DRAFT_03826 0.40 -0.3 354,035 + H281DRAFT_03826 0.59 -0.2 354,060 + +1.0 354,069 + H281DRAFT_03826 0.63 -0.3 354,069 + H281DRAFT_03826 0.63 +0.6 354,402 - +0.2 354,406 + +1.0 354,410 + -0.6 354,410 + -1.0 354,410 + +0.7 354,411 - +0.7 354,414 + -1.8 354,496 - +0.1 354,622 - -0.2 354,829 - H281DRAFT_03827 0.28 -0.5 354,998 + H281DRAFT_03827 0.45 +0.6 354,998 + H281DRAFT_03827 0.45 +0.3 354,999 - H281DRAFT_03827 0.45 +0.7 354,999 - H281DRAFT_03827 0.45 -1.2 355,044 + H281DRAFT_03827 0.50 -0.4 355,044 + H281DRAFT_03827 0.50 -0.6 355,066 + H281DRAFT_03827 0.52 +0.4 355,066 + H281DRAFT_03827 0.52 +2.6 355,371 + H281DRAFT_03827 0.83 -1.3
Or see this region's nucleotide sequence