Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03765 and H281DRAFT_03766 overlap by 4 nucleotides H281DRAFT_03766 and H281DRAFT_03767 are separated by 143 nucleotides H281DRAFT_03767 and H281DRAFT_03768 are separated by 151 nucleotides
H281DRAFT_03765: H281DRAFT_03765 - Uncharacterized conserved protein YgbK, DUF1537 family, at 283,071 to 284,462
_03765
H281DRAFT_03766: H281DRAFT_03766 - glucose 1-dehydrogenase, at 284,459 to 285,259
_03766
H281DRAFT_03767: H281DRAFT_03767 - Protein of unknown function (DUF3309), at 285,403 to 285,558
_03767
H281DRAFT_03768: H281DRAFT_03768 - Predicted arabinose efflux permease, MFS family, at 285,710 to 286,939
_03768
Position (kb) 284
285
286 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 283.677 kb on + strand, within H281DRAFT_03765 at 283.678 kb on - strand, within H281DRAFT_03765 at 283.678 kb on - strand, within H281DRAFT_03765 at 283.747 kb on + strand, within H281DRAFT_03765 at 283.861 kb on - strand, within H281DRAFT_03765 at 284.001 kb on + strand, within H281DRAFT_03765 at 284.059 kb on + strand, within H281DRAFT_03765 at 284.060 kb on - strand, within H281DRAFT_03765 at 284.060 kb on - strand, within H281DRAFT_03765 at 284.111 kb on - strand, within H281DRAFT_03765 at 284.111 kb on - strand, within H281DRAFT_03765 at 284.450 kb on + strand at 284.599 kb on - strand, within H281DRAFT_03766 at 284.615 kb on + strand, within H281DRAFT_03766 at 284.770 kb on - strand, within H281DRAFT_03766 at 284.774 kb on - strand, within H281DRAFT_03766 at 285.298 kb on + strand at 285.298 kb on + strand at 285.299 kb on - strand at 285.305 kb on - strand at 285.373 kb on + strand at 285.374 kb on - strand at 285.473 kb on + strand, within H281DRAFT_03767 at 285.490 kb on - strand, within H281DRAFT_03767 at 285.558 kb on + strand at 285.558 kb on + strand at 285.558 kb on + strand at 285.558 kb on + strand at 285.559 kb on - strand at 285.559 kb on - strand at 285.559 kb on - strand at 285.559 kb on - strand at 285.559 kb on - strand at 285.560 kb on + strand at 285.705 kb on + strand at 285.706 kb on - strand at 285.810 kb on + strand at 285.810 kb on + strand at 285.810 kb on + strand at 285.837 kb on + strand, within H281DRAFT_03768 at 286.206 kb on + strand, within H281DRAFT_03768 at 286.207 kb on - strand, within H281DRAFT_03768 at 286.207 kb on - strand, within H281DRAFT_03768 at 286.258 kb on - strand, within H281DRAFT_03768
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 283,677 + H281DRAFT_03765 0.44 +1.1 283,678 - H281DRAFT_03765 0.44 -0.2 283,678 - H281DRAFT_03765 0.44 +0.3 283,747 + H281DRAFT_03765 0.49 +1.2 283,861 - H281DRAFT_03765 0.57 +1.4 284,001 + H281DRAFT_03765 0.67 -2.9 284,059 + H281DRAFT_03765 0.71 +2.3 284,060 - H281DRAFT_03765 0.71 +0.1 284,060 - H281DRAFT_03765 0.71 -0.4 284,111 - H281DRAFT_03765 0.75 +0.0 284,111 - H281DRAFT_03765 0.75 +1.4 284,450 + +0.8 284,599 - H281DRAFT_03766 0.17 +1.4 284,615 + H281DRAFT_03766 0.19 +0.2 284,770 - H281DRAFT_03766 0.39 -0.1 284,774 - H281DRAFT_03766 0.39 -1.6 285,298 + -0.0 285,298 + +0.6 285,299 - +0.4 285,305 - -0.0 285,373 + +0.0 285,374 - +0.8 285,473 + H281DRAFT_03767 0.45 -1.6 285,490 - H281DRAFT_03767 0.56 +1.4 285,558 + -1.0 285,558 + +0.4 285,558 + +0.5 285,558 + +0.5 285,559 - -1.8 285,559 - +1.0 285,559 - -0.1 285,559 - +0.4 285,559 - +1.7 285,560 + +0.7 285,705 + +0.0 285,706 - +0.4 285,810 + +1.0 285,810 + -3.4 285,810 + +1.0 285,837 + H281DRAFT_03768 0.10 +1.8 286,206 + H281DRAFT_03768 0.40 +0.8 286,207 - H281DRAFT_03768 0.40 -0.1 286,207 - H281DRAFT_03768 0.40 +0.7 286,258 - H281DRAFT_03768 0.45 +0.0
Or see this region's nucleotide sequence