Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03762 and H281DRAFT_03763 are separated by 92 nucleotides H281DRAFT_03763 and H281DRAFT_03764 overlap by 4 nucleotides H281DRAFT_03764 and H281DRAFT_03765 overlap by 4 nucleotides
H281DRAFT_03762: H281DRAFT_03762 - TRAP transporter, DctM subunit, at 279,261 to 281,147
_03762
H281DRAFT_03763: H281DRAFT_03763 - Catechol 2,3-dioxygenase, at 281,240 to 281,779
_03763
H281DRAFT_03764: H281DRAFT_03764 - ribulose-bisphosphate carboxylase large chain, at 281,776 to 283,074
_03764
H281DRAFT_03765: H281DRAFT_03765 - Uncharacterized conserved protein YgbK, DUF1537 family, at 283,071 to 284,462
_03765
Position (kb) 281
282
283
284 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 280.868 kb on - strand, within H281DRAFT_03762 at 281.076 kb on + strand at 281.217 kb on - strand at 281.372 kb on + strand, within H281DRAFT_03763 at 281.372 kb on + strand, within H281DRAFT_03763 at 281.393 kb on + strand, within H281DRAFT_03763 at 281.394 kb on - strand, within H281DRAFT_03763 at 281.480 kb on + strand, within H281DRAFT_03763 at 281.628 kb on - strand, within H281DRAFT_03763 at 281.628 kb on - strand, within H281DRAFT_03763 at 281.775 kb on + strand at 282.729 kb on - strand, within H281DRAFT_03764 at 282.873 kb on + strand, within H281DRAFT_03764 at 283.135 kb on - strand at 283.163 kb on + strand at 283.365 kb on + strand, within H281DRAFT_03765 at 283.677 kb on + strand, within H281DRAFT_03765 at 283.678 kb on - strand, within H281DRAFT_03765 at 283.678 kb on - strand, within H281DRAFT_03765 at 283.747 kb on + strand, within H281DRAFT_03765 at 283.861 kb on - strand, within H281DRAFT_03765 at 284.001 kb on + strand, within H281DRAFT_03765 at 284.059 kb on + strand, within H281DRAFT_03765 at 284.060 kb on - strand, within H281DRAFT_03765 at 284.060 kb on - strand, within H281DRAFT_03765
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 280,868 - H281DRAFT_03762 0.85 -0.8 281,076 + +0.2 281,217 - +0.2 281,372 + H281DRAFT_03763 0.24 +0.6 281,372 + H281DRAFT_03763 0.24 -0.5 281,393 + H281DRAFT_03763 0.28 -0.0 281,394 - H281DRAFT_03763 0.29 -0.0 281,480 + H281DRAFT_03763 0.44 +1.8 281,628 - H281DRAFT_03763 0.72 -1.9 281,628 - H281DRAFT_03763 0.72 +0.1 281,775 + +0.1 282,729 - H281DRAFT_03764 0.73 -0.6 282,873 + H281DRAFT_03764 0.84 +0.7 283,135 - +0.0 283,163 + +1.4 283,365 + H281DRAFT_03765 0.21 +1.0 283,677 + H281DRAFT_03765 0.44 +1.1 283,678 - H281DRAFT_03765 0.44 -0.2 283,678 - H281DRAFT_03765 0.44 +0.3 283,747 + H281DRAFT_03765 0.49 +1.2 283,861 - H281DRAFT_03765 0.57 +1.4 284,001 + H281DRAFT_03765 0.67 -2.9 284,059 + H281DRAFT_03765 0.71 +2.3 284,060 - H281DRAFT_03765 0.71 +0.1 284,060 - H281DRAFT_03765 0.71 -0.4
Or see this region's nucleotide sequence