Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03712 and H281DRAFT_03713 are separated by 73 nucleotides H281DRAFT_03713 and H281DRAFT_03714 are separated by 133 nucleotides
H281DRAFT_03712: H281DRAFT_03712 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 227,267 to 228,058
_03712
H281DRAFT_03713: H281DRAFT_03713 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 228,132 to 228,896
_03713
H281DRAFT_03714: H281DRAFT_03714 - transcriptional regulator, LysR family, at 229,030 to 229,974
_03714
Position (kb) 228
229 Strain fitness (log2 ratio) -2
-1
0
1
2 at 227.283 kb on - strand at 227.346 kb on + strand at 227.347 kb on - strand, within H281DRAFT_03712 at 228.137 kb on + strand at 228.137 kb on + strand at 228.549 kb on + strand, within H281DRAFT_03713 at 228.722 kb on - strand, within H281DRAFT_03713 at 228.846 kb on - strand at 228.846 kb on - strand at 228.952 kb on + strand at 228.954 kb on + strand at 228.955 kb on - strand at 229.444 kb on + strand, within H281DRAFT_03714 at 229.541 kb on - strand, within H281DRAFT_03714 at 229.609 kb on + strand, within H281DRAFT_03714 at 229.609 kb on + strand, within H281DRAFT_03714 at 229.610 kb on - strand, within H281DRAFT_03714 at 229.690 kb on - strand, within H281DRAFT_03714 at 229.775 kb on + strand, within H281DRAFT_03714 at 229.832 kb on + strand, within H281DRAFT_03714 at 229.843 kb on + strand, within H281DRAFT_03714
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 227,283 - +0.3 227,346 + -0.1 227,347 - H281DRAFT_03712 0.10 -0.7 228,137 + +0.1 228,137 + +0.0 228,549 + H281DRAFT_03713 0.55 +0.7 228,722 - H281DRAFT_03713 0.77 +1.0 228,846 - -0.3 228,846 - +0.3 228,952 + -0.5 228,954 + +0.1 228,955 - -0.4 229,444 + H281DRAFT_03714 0.44 -0.4 229,541 - H281DRAFT_03714 0.54 +2.6 229,609 + H281DRAFT_03714 0.61 -1.1 229,609 + H281DRAFT_03714 0.61 -0.5 229,610 - H281DRAFT_03714 0.61 -0.3 229,690 - H281DRAFT_03714 0.70 +0.3 229,775 + H281DRAFT_03714 0.79 +0.3 229,832 + H281DRAFT_03714 0.85 -2.0 229,843 + H281DRAFT_03714 0.86 +0.3
Or see this region's nucleotide sequence