Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03636 and H281DRAFT_03637 overlap by 8 nucleotides H281DRAFT_03637 and H281DRAFT_03638 are separated by 26 nucleotides H281DRAFT_03638 and H281DRAFT_03639 are separated by 32 nucleotides
H281DRAFT_03636: H281DRAFT_03636 - Phenylpropionate dioxygenase, large terminal subunit, at 144,880 to 145,983
_03636
H281DRAFT_03637: H281DRAFT_03637 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 145,976 to 146,743
_03637
H281DRAFT_03638: H281DRAFT_03638 - Cupin domain-containing protein, at 146,770 to 147,297
_03638
H281DRAFT_03639: H281DRAFT_03639 - Pimeloyl-ACP methyl ester carboxylesterase, at 147,330 to 148,223
_03639
Position (kb) 145
146
147 Strain fitness (log2 ratio) -1
0
1 at 145.336 kb on + strand, within H281DRAFT_03636 at 145.381 kb on + strand, within H281DRAFT_03636 at 145.729 kb on + strand, within H281DRAFT_03636 at 145.780 kb on + strand, within H281DRAFT_03636 at 145.781 kb on - strand, within H281DRAFT_03636 at 145.828 kb on + strand, within H281DRAFT_03636 at 145.981 kb on + strand at 146.165 kb on + strand, within H281DRAFT_03637 at 146.371 kb on - strand, within H281DRAFT_03637 at 146.580 kb on - strand, within H281DRAFT_03637 at 146.603 kb on + strand, within H281DRAFT_03637 at 146.939 kb on - strand, within H281DRAFT_03638
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 145,336 + H281DRAFT_03636 0.41 -0.6 145,381 + H281DRAFT_03636 0.45 +0.3 145,729 + H281DRAFT_03636 0.77 -0.4 145,780 + H281DRAFT_03636 0.82 +1.6 145,781 - H281DRAFT_03636 0.82 -0.1 145,828 + H281DRAFT_03636 0.86 -0.6 145,981 + -0.1 146,165 + H281DRAFT_03637 0.25 -1.6 146,371 - H281DRAFT_03637 0.51 -1.1 146,580 - H281DRAFT_03637 0.79 -0.4 146,603 + H281DRAFT_03637 0.82 -0.6 146,939 - H281DRAFT_03638 0.32 -0.4
Or see this region's nucleotide sequence