Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03561 and H281DRAFT_03562 are separated by 165 nucleotides H281DRAFT_03562 and H281DRAFT_03563 are separated by 5 nucleotides
H281DRAFT_03561: H281DRAFT_03561 - Threonine/homoserine efflux transporter RhtA, at 66,957 to 67,853
_03561
H281DRAFT_03562: H281DRAFT_03562 - AraC family transcriptional regulator, at 68,019 to 68,936
_03562
H281DRAFT_03563: H281DRAFT_03563 - FAD/FMN-containing dehydrogenase, at 68,942 to 71,962
_03563
Position (kb)
68
69 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 67.063 kb on + strand, within H281DRAFT_03561 at 67.219 kb on + strand, within H281DRAFT_03561 at 67.219 kb on + strand, within H281DRAFT_03561 at 67.219 kb on + strand, within H281DRAFT_03561 at 67.220 kb on - strand, within H281DRAFT_03561 at 67.467 kb on - strand, within H281DRAFT_03561 at 67.609 kb on + strand, within H281DRAFT_03561 at 67.612 kb on + strand, within H281DRAFT_03561 at 67.613 kb on - strand, within H281DRAFT_03561 at 67.955 kb on + strand at 67.955 kb on + strand at 67.956 kb on - strand at 67.982 kb on - strand at 67.985 kb on + strand at 67.985 kb on + strand at 67.985 kb on + strand at 67.985 kb on + strand at 67.986 kb on - strand at 67.986 kb on - strand at 67.994 kb on - strand at 68.227 kb on - strand, within H281DRAFT_03562 at 68.303 kb on - strand, within H281DRAFT_03562 at 68.343 kb on - strand, within H281DRAFT_03562 at 68.362 kb on - strand, within H281DRAFT_03562 at 68.445 kb on + strand, within H281DRAFT_03562 at 68.445 kb on + strand, within H281DRAFT_03562 at 68.842 kb on + strand, within H281DRAFT_03562 at 68.843 kb on - strand, within H281DRAFT_03562 at 68.870 kb on + strand at 68.935 kb on - strand at 68.935 kb on - strand at 69.077 kb on + strand at 69.078 kb on - strand at 69.078 kb on - strand at 69.111 kb on + strand at 69.218 kb on - strand at 69.384 kb on + strand, within H281DRAFT_03563 at 69.662 kb on + strand, within H281DRAFT_03563 at 69.662 kb on + strand, within H281DRAFT_03563 at 69.663 kb on - strand, within H281DRAFT_03563
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 67,063 + H281DRAFT_03561 0.12 +0.2 67,219 + H281DRAFT_03561 0.29 +0.0 67,219 + H281DRAFT_03561 0.29 +0.1 67,219 + H281DRAFT_03561 0.29 +1.4 67,220 - H281DRAFT_03561 0.29 -0.5 67,467 - H281DRAFT_03561 0.57 -0.2 67,609 + H281DRAFT_03561 0.73 +0.3 67,612 + H281DRAFT_03561 0.73 -1.6 67,613 - H281DRAFT_03561 0.73 -2.1 67,955 + +0.0 67,955 + -2.2 67,956 - +0.4 67,982 - +0.9 67,985 + -0.4 67,985 + +0.8 67,985 + -0.1 67,985 + +0.0 67,986 - -0.6 67,986 - -0.2 67,994 - +0.5 68,227 - H281DRAFT_03562 0.23 +1.2 68,303 - H281DRAFT_03562 0.31 -0.7 68,343 - H281DRAFT_03562 0.35 +0.1 68,362 - H281DRAFT_03562 0.37 +0.3 68,445 + H281DRAFT_03562 0.46 +1.3 68,445 + H281DRAFT_03562 0.46 -0.6 68,842 + H281DRAFT_03562 0.90 -0.1 68,843 - H281DRAFT_03562 0.90 -0.2 68,870 + -1.0 68,935 - -0.3 68,935 - -0.3 69,077 + -0.2 69,078 - +0.2 69,078 - +1.9 69,111 + -0.8 69,218 - -0.2 69,384 + H281DRAFT_03563 0.15 -0.0 69,662 + H281DRAFT_03563 0.24 -0.5 69,662 + H281DRAFT_03563 0.24 +0.8 69,663 - H281DRAFT_03563 0.24 -1.1
Or see this region's nucleotide sequence