Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03450 and H281DRAFT_03451 overlap by 4 nucleotides H281DRAFT_03451 and H281DRAFT_03452 overlap by 4 nucleotides H281DRAFT_03452 and H281DRAFT_03453 are separated by 181 nucleotides
H281DRAFT_03450: H281DRAFT_03450 - ABC-2 type transport system permease protein, at 532,008 to 533,150
_03450
H281DRAFT_03451: H281DRAFT_03451 - ABC-2 type transport system ATP-binding protein, at 533,147 to 534,097
_03451
H281DRAFT_03452: H281DRAFT_03452 - HlyD family secretion protein, at 534,094 to 535,062
_03452
H281DRAFT_03453: H281DRAFT_03453 - transcriptional regulator, TetR family, at 535,244 to 536,077
_03453
Position (kb) 534
535
536 Strain fitness (log2 ratio) -1
0
1 at 533.319 kb on - strand, within H281DRAFT_03451 at 533.467 kb on - strand, within H281DRAFT_03451 at 533.763 kb on + strand, within H281DRAFT_03451 at 534.173 kb on + strand at 534.173 kb on + strand at 534.173 kb on + strand at 534.174 kb on - strand at 534.203 kb on + strand, within H281DRAFT_03452 at 534.242 kb on + strand, within H281DRAFT_03452 at 534.242 kb on + strand, within H281DRAFT_03452 at 534.243 kb on - strand, within H281DRAFT_03452 at 534.293 kb on - strand, within H281DRAFT_03452 at 534.346 kb on + strand, within H281DRAFT_03452 at 534.955 kb on + strand, within H281DRAFT_03452 at 535.539 kb on + strand, within H281DRAFT_03453 at 535.578 kb on - strand, within H281DRAFT_03453 at 535.605 kb on - strand, within H281DRAFT_03453 at 535.993 kb on + strand, within H281DRAFT_03453
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 533,319 - H281DRAFT_03451 0.18 +0.1 533,467 - H281DRAFT_03451 0.34 -0.9 533,763 + H281DRAFT_03451 0.65 +1.3 534,173 + +1.3 534,173 + -0.1 534,173 + -0.3 534,174 - +0.6 534,203 + H281DRAFT_03452 0.11 -1.6 534,242 + H281DRAFT_03452 0.15 -1.3 534,242 + H281DRAFT_03452 0.15 +1.1 534,243 - H281DRAFT_03452 0.15 -0.3 534,293 - H281DRAFT_03452 0.21 +0.0 534,346 + H281DRAFT_03452 0.26 +0.3 534,955 + H281DRAFT_03452 0.89 +0.7 535,539 + H281DRAFT_03453 0.35 -0.4 535,578 - H281DRAFT_03453 0.40 -0.7 535,605 - H281DRAFT_03453 0.43 -1.1 535,993 + H281DRAFT_03453 0.90 -0.2
Or see this region's nucleotide sequence