Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03403 and H281DRAFT_03404 are separated by 22 nucleotides H281DRAFT_03404 and H281DRAFT_03405 are separated by 92 nucleotides H281DRAFT_03405 and H281DRAFT_03406 are separated by 573 nucleotides
H281DRAFT_03403: H281DRAFT_03403 - Predicted ATPase, at 472,661 to 474,166
_03403
H281DRAFT_03404: H281DRAFT_03404 - Response regulator, at 474,189 to 474,563
_03404
H281DRAFT_03405: H281DRAFT_03405 - catalase, at 474,656 to 476,119
_03405
H281DRAFT_03406: H281DRAFT_03406 - Protein of unknown function (DUF3455), at 476,693 to 477,208
_03406
Position (kb) 474
475
476
477 Strain fitness (log2 ratio) -1
0
1 at 474.636 kb on + strand at 474.873 kb on + strand, within H281DRAFT_03405 at 475.036 kb on - strand, within H281DRAFT_03405 at 475.036 kb on - strand, within H281DRAFT_03405 at 475.555 kb on + strand, within H281DRAFT_03405 at 475.556 kb on - strand, within H281DRAFT_03405 at 475.556 kb on - strand, within H281DRAFT_03405 at 475.556 kb on - strand, within H281DRAFT_03405 at 475.556 kb on - strand, within H281DRAFT_03405 at 475.804 kb on + strand, within H281DRAFT_03405 at 475.906 kb on + strand, within H281DRAFT_03405 at 475.908 kb on + strand, within H281DRAFT_03405 at 475.969 kb on + strand, within H281DRAFT_03405 at 476.124 kb on + strand at 476.125 kb on - strand at 476.456 kb on - strand at 476.480 kb on - strand at 476.482 kb on - strand at 476.849 kb on + strand, within H281DRAFT_03406 at 476.915 kb on + strand, within H281DRAFT_03406 at 476.916 kb on - strand, within H281DRAFT_03406
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 474,636 + +0.2 474,873 + H281DRAFT_03405 0.15 -1.1 475,036 - H281DRAFT_03405 0.26 -0.4 475,036 - H281DRAFT_03405 0.26 -0.9 475,555 + H281DRAFT_03405 0.61 +0.8 475,556 - H281DRAFT_03405 0.61 -1.1 475,556 - H281DRAFT_03405 0.61 -0.3 475,556 - H281DRAFT_03405 0.61 +0.2 475,556 - H281DRAFT_03405 0.61 +0.1 475,804 + H281DRAFT_03405 0.78 +0.4 475,906 + H281DRAFT_03405 0.85 -0.5 475,908 + H281DRAFT_03405 0.86 -1.1 475,969 + H281DRAFT_03405 0.90 +0.1 476,124 + -0.8 476,125 - +1.0 476,456 - +0.8 476,480 - -0.2 476,482 - -1.4 476,849 + H281DRAFT_03406 0.30 -0.2 476,915 + H281DRAFT_03406 0.43 -0.0 476,916 - H281DRAFT_03406 0.43 -0.2
Or see this region's nucleotide sequence