Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03373 and H281DRAFT_03374 are separated by 794 nucleotides H281DRAFT_03374 and H281DRAFT_03375 are separated by 526 nucleotides
H281DRAFT_03373: H281DRAFT_03373 - Low temperature requirement protein LtrA, at 435,703 to 436,815
_03373
H281DRAFT_03374: H281DRAFT_03374 - hypothetical protein, at 437,610 to 439,712
_03374
H281DRAFT_03375: H281DRAFT_03375 - Dimerisation domain-containing protein, at 440,239 to 441,300
_03375
Position (kb) 437
438
439
440 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 436.613 kb on + strand, within H281DRAFT_03373 at 436.716 kb on + strand at 436.779 kb on + strand at 436.970 kb on + strand at 436.977 kb on + strand at 437.224 kb on + strand at 437.225 kb on - strand at 437.389 kb on + strand at 437.589 kb on + strand at 437.637 kb on + strand at 437.638 kb on - strand at 437.666 kb on - strand at 438.189 kb on - strand, within H281DRAFT_03374 at 438.264 kb on - strand, within H281DRAFT_03374 at 438.359 kb on - strand, within H281DRAFT_03374 at 438.473 kb on - strand, within H281DRAFT_03374 at 439.010 kb on - strand, within H281DRAFT_03374 at 439.018 kb on - strand, within H281DRAFT_03374 at 439.920 kb on + strand at 440.241 kb on - strand at 440.472 kb on - strand, within H281DRAFT_03375 at 440.699 kb on - strand, within H281DRAFT_03375 at 440.704 kb on + strand, within H281DRAFT_03375 at 440.704 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 436,613 + H281DRAFT_03373 0.82 +0.4 436,716 + -2.8 436,779 + -0.2 436,970 + +0.8 436,977 + -1.2 437,224 + -0.4 437,225 - +0.2 437,389 + +0.1 437,589 + -0.0 437,637 + -0.7 437,638 - -0.2 437,666 - +0.4 438,189 - H281DRAFT_03374 0.28 -2.7 438,264 - H281DRAFT_03374 0.31 -0.8 438,359 - H281DRAFT_03374 0.36 +0.2 438,473 - H281DRAFT_03374 0.41 +0.2 439,010 - H281DRAFT_03374 0.67 -1.3 439,018 - H281DRAFT_03374 0.67 -0.5 439,920 + -2.7 440,241 - -0.5 440,472 - H281DRAFT_03375 0.22 +0.2 440,699 - H281DRAFT_03375 0.43 +0.1 440,704 + H281DRAFT_03375 0.44 -0.6 440,704 + +0.4
Or see this region's nucleotide sequence