Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03360 and H281DRAFT_03361 are separated by 12 nucleotides H281DRAFT_03361 and H281DRAFT_03362 are separated by 20 nucleotides
H281DRAFT_03360: H281DRAFT_03360 - succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase, at 419,293 to 420,774
_03360
H281DRAFT_03361: H281DRAFT_03361 - 2-keto-3-deoxy-L-rhamnonate aldolase RhmA, at 420,787 to 421,611
_03361
H281DRAFT_03362: H281DRAFT_03362 - Acyl-CoA dehydrogenase, at 421,632 to 422,813
_03362
Position (kb) 420
421
422 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 419.937 kb on + strand, within H281DRAFT_03360 at 420.176 kb on - strand, within H281DRAFT_03360 at 420.176 kb on - strand, within H281DRAFT_03360 at 420.353 kb on + strand, within H281DRAFT_03360 at 420.417 kb on + strand, within H281DRAFT_03360 at 420.418 kb on - strand, within H281DRAFT_03360 at 420.618 kb on + strand, within H281DRAFT_03360 at 420.619 kb on - strand, within H281DRAFT_03360 at 420.709 kb on + strand at 421.087 kb on - strand, within H281DRAFT_03361 at 421.116 kb on + strand, within H281DRAFT_03361 at 421.116 kb on + strand, within H281DRAFT_03361 at 421.117 kb on - strand, within H281DRAFT_03361 at 421.365 kb on + strand, within H281DRAFT_03361 at 421.365 kb on + strand, within H281DRAFT_03361 at 421.444 kb on + strand, within H281DRAFT_03361 at 421.468 kb on + strand, within H281DRAFT_03361 at 421.676 kb on + strand at 421.684 kb on - strand at 421.755 kb on + strand, within H281DRAFT_03362 at 421.755 kb on + strand, within H281DRAFT_03362 at 421.756 kb on - strand, within H281DRAFT_03362 at 421.989 kb on - strand, within H281DRAFT_03362 at 422.119 kb on + strand, within H281DRAFT_03362 at 422.120 kb on - strand, within H281DRAFT_03362 at 422.166 kb on + strand, within H281DRAFT_03362 at 422.166 kb on + strand, within H281DRAFT_03362 at 422.167 kb on - strand, within H281DRAFT_03362 at 422.169 kb on - strand, within H281DRAFT_03362 at 422.238 kb on - strand, within H281DRAFT_03362 at 422.313 kb on + strand, within H281DRAFT_03362 at 422.464 kb on - strand, within H281DRAFT_03362
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 419,937 + H281DRAFT_03360 0.43 -2.9 420,176 - H281DRAFT_03360 0.60 +0.8 420,176 - H281DRAFT_03360 0.60 -0.0 420,353 + H281DRAFT_03360 0.72 +0.5 420,417 + H281DRAFT_03360 0.76 +1.1 420,418 - H281DRAFT_03360 0.76 +1.6 420,618 + H281DRAFT_03360 0.89 -1.2 420,619 - H281DRAFT_03360 0.89 +0.7 420,709 + +0.5 421,087 - H281DRAFT_03361 0.36 -0.5 421,116 + H281DRAFT_03361 0.40 +1.1 421,116 + H281DRAFT_03361 0.40 -1.7 421,117 - H281DRAFT_03361 0.40 -1.7 421,365 + H281DRAFT_03361 0.70 +0.6 421,365 + H281DRAFT_03361 0.70 -1.8 421,444 + H281DRAFT_03361 0.80 +0.6 421,468 + H281DRAFT_03361 0.83 +0.6 421,676 + +0.3 421,684 - +1.8 421,755 + H281DRAFT_03362 0.10 -0.1 421,755 + H281DRAFT_03362 0.10 +1.5 421,756 - H281DRAFT_03362 0.10 -0.1 421,989 - H281DRAFT_03362 0.30 +0.1 422,119 + H281DRAFT_03362 0.41 +0.3 422,120 - H281DRAFT_03362 0.41 +1.1 422,166 + H281DRAFT_03362 0.45 -0.5 422,166 + H281DRAFT_03362 0.45 +0.7 422,167 - H281DRAFT_03362 0.45 -0.7 422,169 - H281DRAFT_03362 0.45 -1.9 422,238 - H281DRAFT_03362 0.51 +0.3 422,313 + H281DRAFT_03362 0.58 +1.6 422,464 - H281DRAFT_03362 0.70 -0.1
Or see this region's nucleotide sequence