Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03359 and H281DRAFT_03360 are separated by 241 nucleotides H281DRAFT_03360 and H281DRAFT_03361 are separated by 12 nucleotides H281DRAFT_03361 and H281DRAFT_03362 are separated by 20 nucleotides
H281DRAFT_03359: H281DRAFT_03359 - tripartite ATP-independent transporter solute receptor, DctP family, at 418,023 to 419,051
_03359
H281DRAFT_03360: H281DRAFT_03360 - succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase, at 419,293 to 420,774
_03360
H281DRAFT_03361: H281DRAFT_03361 - 2-keto-3-deoxy-L-rhamnonate aldolase RhmA, at 420,787 to 421,611
_03361
H281DRAFT_03362: H281DRAFT_03362 - Acyl-CoA dehydrogenase, at 421,632 to 422,813
_03362
Position (kb) 419
420
421 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 418.342 kb on + strand, within H281DRAFT_03359 at 418.357 kb on + strand, within H281DRAFT_03359 at 418.358 kb on - strand, within H281DRAFT_03359 at 418.430 kb on - strand, within H281DRAFT_03359 at 418.446 kb on - strand, within H281DRAFT_03359 at 418.543 kb on - strand, within H281DRAFT_03359 at 418.639 kb on + strand, within H281DRAFT_03359 at 418.640 kb on - strand, within H281DRAFT_03359 at 418.797 kb on - strand, within H281DRAFT_03359 at 418.797 kb on - strand, within H281DRAFT_03359 at 418.931 kb on - strand, within H281DRAFT_03359 at 419.066 kb on + strand at 419.118 kb on - strand at 419.278 kb on + strand at 419.279 kb on - strand at 419.279 kb on - strand at 419.300 kb on + strand at 419.301 kb on - strand at 419.410 kb on + strand at 419.413 kb on - strand at 419.680 kb on + strand, within H281DRAFT_03360 at 419.937 kb on + strand, within H281DRAFT_03360 at 420.176 kb on - strand, within H281DRAFT_03360 at 420.176 kb on - strand, within H281DRAFT_03360 at 420.353 kb on + strand, within H281DRAFT_03360 at 420.417 kb on + strand, within H281DRAFT_03360 at 420.418 kb on - strand, within H281DRAFT_03360 at 420.618 kb on + strand, within H281DRAFT_03360 at 420.619 kb on - strand, within H281DRAFT_03360 at 420.709 kb on + strand at 421.087 kb on - strand, within H281DRAFT_03361 at 421.116 kb on + strand, within H281DRAFT_03361 at 421.116 kb on + strand, within H281DRAFT_03361 at 421.117 kb on - strand, within H281DRAFT_03361 at 421.365 kb on + strand, within H281DRAFT_03361 at 421.365 kb on + strand, within H281DRAFT_03361 at 421.444 kb on + strand, within H281DRAFT_03361 at 421.468 kb on + strand, within H281DRAFT_03361 at 421.676 kb on + strand at 421.684 kb on - strand at 421.755 kb on + strand, within H281DRAFT_03362 at 421.755 kb on + strand, within H281DRAFT_03362 at 421.756 kb on - strand, within H281DRAFT_03362
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 418,342 + H281DRAFT_03359 0.31 +0.5 418,357 + H281DRAFT_03359 0.32 -0.5 418,358 - H281DRAFT_03359 0.33 -1.0 418,430 - H281DRAFT_03359 0.40 +0.0 418,446 - H281DRAFT_03359 0.41 +0.4 418,543 - H281DRAFT_03359 0.51 +0.2 418,639 + H281DRAFT_03359 0.60 -0.1 418,640 - H281DRAFT_03359 0.60 -0.6 418,797 - H281DRAFT_03359 0.75 -0.7 418,797 - H281DRAFT_03359 0.75 +0.6 418,931 - H281DRAFT_03359 0.88 +0.0 419,066 + +0.1 419,118 - +0.6 419,278 + +1.2 419,279 - -0.3 419,279 - -2.1 419,300 + -0.2 419,301 - +0.4 419,410 + +1.8 419,413 - +0.3 419,680 + H281DRAFT_03360 0.26 -1.3 419,937 + H281DRAFT_03360 0.43 -2.9 420,176 - H281DRAFT_03360 0.60 +0.8 420,176 - H281DRAFT_03360 0.60 -0.0 420,353 + H281DRAFT_03360 0.72 +0.5 420,417 + H281DRAFT_03360 0.76 +1.1 420,418 - H281DRAFT_03360 0.76 +1.6 420,618 + H281DRAFT_03360 0.89 -1.2 420,619 - H281DRAFT_03360 0.89 +0.7 420,709 + +0.5 421,087 - H281DRAFT_03361 0.36 -0.5 421,116 + H281DRAFT_03361 0.40 +1.1 421,116 + H281DRAFT_03361 0.40 -1.7 421,117 - H281DRAFT_03361 0.40 -1.7 421,365 + H281DRAFT_03361 0.70 +0.6 421,365 + H281DRAFT_03361 0.70 -1.8 421,444 + H281DRAFT_03361 0.80 +0.6 421,468 + H281DRAFT_03361 0.83 +0.6 421,676 + +0.3 421,684 - +1.8 421,755 + H281DRAFT_03362 0.10 -0.1 421,755 + H281DRAFT_03362 0.10 +1.5 421,756 - H281DRAFT_03362 0.10 -0.1
Or see this region's nucleotide sequence