Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03281

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03280 and H281DRAFT_03281 are separated by 57 nucleotidesH281DRAFT_03281 and H281DRAFT_03282 overlap by 11 nucleotides H281DRAFT_03280: H281DRAFT_03280 - UDP-glucuronate decarboxylase, at 337,093 to 338,112 _03280 H281DRAFT_03281: H281DRAFT_03281 - Glycosyltransferase, at 338,170 to 339,126 _03281 H281DRAFT_03282: H281DRAFT_03282 - ADP-heptose:LPS heptosyltransferase, at 339,116 to 340,255 _03282 Position (kb) 338 339 340Strain fitness (log2 ratio) -3 -2 -1 0 1at 337.457 kb on + strand, within H281DRAFT_03280at 337.574 kb on + strand, within H281DRAFT_03280at 337.707 kb on - strand, within H281DRAFT_03280at 337.743 kb on - strand, within H281DRAFT_03280at 337.857 kb on - strand, within H281DRAFT_03280at 337.888 kb on - strand, within H281DRAFT_03280at 338.101 kb on - strandat 338.588 kb on - strand, within H281DRAFT_03281at 338.886 kb on - strand, within H281DRAFT_03281at 339.062 kb on + strandat 339.876 kb on - strand, within H281DRAFT_03282at 339.889 kb on - strand, within H281DRAFT_03282at 340.077 kb on + strand, within H281DRAFT_03282

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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337,457 + H281DRAFT_03280 0.36 -0.2
337,574 + H281DRAFT_03280 0.47 +0.2
337,707 - H281DRAFT_03280 0.60 -0.4
337,743 - H281DRAFT_03280 0.64 +0.8
337,857 - H281DRAFT_03280 0.75 -0.1
337,888 - H281DRAFT_03280 0.78 -0.8
338,101 - -2.8
338,588 - H281DRAFT_03281 0.44 -0.6
338,886 - H281DRAFT_03281 0.75 -2.2
339,062 + -0.2
339,876 - H281DRAFT_03282 0.67 +0.4
339,889 - H281DRAFT_03282 0.68 +0.3
340,077 + H281DRAFT_03282 0.84 -0.6

Or see this region's nucleotide sequence