Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03271 and H281DRAFT_03272 are separated by 377 nucleotides H281DRAFT_03272 and H281DRAFT_03273 are separated by 108 nucleotides H281DRAFT_03273 and H281DRAFT_03274 overlap by 4 nucleotides H281DRAFT_03274 and H281DRAFT_03275 are separated by 144 nucleotides
H281DRAFT_03271: H281DRAFT_03271 - hypothetical protein, at 329,783 to 329,995
_03271
H281DRAFT_03272: H281DRAFT_03272 - Uncharacterized conserved protein YjbJ, UPF0337 family, at 330,373 to 330,657
_03272
H281DRAFT_03273: H281DRAFT_03273 - Uncharacterized membrane protein YqjE, at 330,766 to 331,140
_03273
H281DRAFT_03274: H281DRAFT_03274 - hypothetical protein, at 331,137 to 331,439
_03274
H281DRAFT_03275: H281DRAFT_03275 - Threonine dehydrogenase, at 331,584 to 332,753
_03275
Position (kb) 330
331
332 Strain fitness (log2 ratio) -1
0
1
2 at 329.934 kb on + strand, within H281DRAFT_03271 at 329.934 kb on + strand, within H281DRAFT_03271 at 329.935 kb on - strand, within H281DRAFT_03271 at 330.034 kb on + strand at 330.052 kb on + strand at 330.083 kb on + strand at 330.147 kb on + strand at 330.159 kb on - strand at 330.345 kb on + strand at 330.411 kb on - strand, within H281DRAFT_03272 at 330.773 kb on + strand at 330.773 kb on + strand at 330.774 kb on - strand at 330.777 kb on + strand at 330.982 kb on + strand, within H281DRAFT_03273 at 330.983 kb on - strand, within H281DRAFT_03273 at 331.309 kb on - strand, within H281DRAFT_03274 at 331.557 kb on - strand at 331.581 kb on + strand at 331.581 kb on + strand at 331.581 kb on + strand at 331.582 kb on - strand at 331.582 kb on - strand at 331.583 kb on + strand at 331.583 kb on + strand at 331.583 kb on + strand at 331.583 kb on + strand at 331.583 kb on + strand at 331.679 kb on - strand at 331.679 kb on - strand at 331.694 kb on - strand at 331.770 kb on - strand, within H281DRAFT_03275 at 331.905 kb on - strand, within H281DRAFT_03275
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 329,934 + H281DRAFT_03271 0.71 -0.1 329,934 + H281DRAFT_03271 0.71 +0.3 329,935 - H281DRAFT_03271 0.71 +0.1 330,034 + -0.8 330,052 + +1.0 330,083 + +1.0 330,147 + -0.0 330,159 - +0.6 330,345 + -0.6 330,411 - H281DRAFT_03272 0.13 -0.1 330,773 + +0.3 330,773 + -0.2 330,774 - -1.0 330,777 + -0.2 330,982 + H281DRAFT_03273 0.58 -1.2 330,983 - H281DRAFT_03273 0.58 -0.3 331,309 - H281DRAFT_03274 0.57 -0.0 331,557 - -0.1 331,581 + -1.1 331,581 + -0.4 331,581 + -0.5 331,582 - +0.2 331,582 - -1.1 331,583 + +0.7 331,583 + -0.3 331,583 + -0.1 331,583 + +0.2 331,583 + +1.2 331,679 - +0.3 331,679 - +1.9 331,694 - -0.1 331,770 - H281DRAFT_03275 0.16 +0.2 331,905 - H281DRAFT_03275 0.27 -0.2
Or see this region's nucleotide sequence