Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03166 and H281DRAFT_03167 are separated by 57 nucleotides H281DRAFT_03167 and H281DRAFT_03168 are separated by 228 nucleotides H281DRAFT_03168 and H281DRAFT_03169 are separated by 23 nucleotides
H281DRAFT_03166: H281DRAFT_03166 - Protein of unknown function (DUF2894), at 206,651 to 207,379
_03166
H281DRAFT_03167: H281DRAFT_03167 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 207,437 to 208,111
_03167
H281DRAFT_03168: H281DRAFT_03168 - FOG: CheY-like receiver, at 208,340 to 209,371
_03168
H281DRAFT_03169: H281DRAFT_03169 - Signal transduction histidine kinase, at 209,395 to 210,825
_03169
Position (kb) 208
209
210 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 207.405 kb on - strand at 207.405 kb on - strand at 207.405 kb on - strand at 207.494 kb on + strand at 207.688 kb on - strand, within H281DRAFT_03167 at 207.699 kb on + strand, within H281DRAFT_03167 at 207.700 kb on - strand, within H281DRAFT_03167 at 207.700 kb on - strand, within H281DRAFT_03167 at 207.863 kb on + strand, within H281DRAFT_03167 at 207.863 kb on + strand, within H281DRAFT_03167 at 207.863 kb on + strand, within H281DRAFT_03167 at 207.939 kb on + strand, within H281DRAFT_03167 at 208.220 kb on + strand at 208.244 kb on - strand at 208.246 kb on + strand at 208.246 kb on + strand at 208.246 kb on + strand at 208.246 kb on + strand at 208.246 kb on + strand at 208.246 kb on + strand at 208.247 kb on - strand at 208.247 kb on - strand at 208.247 kb on - strand at 208.247 kb on - strand at 208.248 kb on + strand at 208.249 kb on - strand at 208.249 kb on - strand at 208.282 kb on + strand at 208.282 kb on + strand at 208.283 kb on - strand at 208.297 kb on + strand at 208.297 kb on + strand at 208.298 kb on - strand at 208.298 kb on - strand at 208.298 kb on - strand at 208.319 kb on + strand at 208.393 kb on + strand at 208.393 kb on + strand at 208.394 kb on - strand at 208.394 kb on - strand at 208.469 kb on + strand, within H281DRAFT_03168 at 208.470 kb on - strand, within H281DRAFT_03168 at 208.551 kb on + strand, within H281DRAFT_03168 at 208.552 kb on - strand, within H281DRAFT_03168 at 208.707 kb on - strand, within H281DRAFT_03168 at 208.707 kb on - strand, within H281DRAFT_03168 at 208.839 kb on + strand, within H281DRAFT_03168 at 208.839 kb on + strand, within H281DRAFT_03168 at 208.839 kb on + strand, within H281DRAFT_03168 at 208.840 kb on - strand, within H281DRAFT_03168 at 208.841 kb on + strand, within H281DRAFT_03168 at 208.958 kb on + strand, within H281DRAFT_03168 at 208.958 kb on + strand, within H281DRAFT_03168 at 208.959 kb on - strand, within H281DRAFT_03168 at 209.025 kb on - strand, within H281DRAFT_03168 at 209.112 kb on + strand, within H281DRAFT_03168 at 209.112 kb on + strand, within H281DRAFT_03168 at 209.113 kb on - strand, within H281DRAFT_03168 at 209.214 kb on - strand, within H281DRAFT_03168 at 209.279 kb on + strand at 209.280 kb on - strand at 209.398 kb on + strand at 209.399 kb on - strand at 209.399 kb on - strand at 209.399 kb on - strand at 209.449 kb on + strand at 209.449 kb on + strand at 209.450 kb on - strand at 209.450 kb on - strand at 209.593 kb on + strand, within H281DRAFT_03169 at 209.626 kb on + strand, within H281DRAFT_03169 at 209.686 kb on + strand, within H281DRAFT_03169 at 209.753 kb on - strand, within H281DRAFT_03169 at 209.753 kb on - strand, within H281DRAFT_03169 at 209.917 kb on + strand, within H281DRAFT_03169 at 209.918 kb on - strand, within H281DRAFT_03169 at 209.950 kb on + strand, within H281DRAFT_03169 at 209.951 kb on - strand, within H281DRAFT_03169 at 210.060 kb on + strand, within H281DRAFT_03169 at 210.061 kb on - strand, within H281DRAFT_03169 at 210.061 kb on - strand, within H281DRAFT_03169 at 210.178 kb on + strand at 210.179 kb on - strand, within H281DRAFT_03169
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 207,405 - -0.5 207,405 - +1.9 207,405 - -0.7 207,494 + +0.4 207,688 - H281DRAFT_03167 0.37 -0.7 207,699 + H281DRAFT_03167 0.39 +0.1 207,700 - H281DRAFT_03167 0.39 -0.4 207,700 - H281DRAFT_03167 0.39 -0.5 207,863 + H281DRAFT_03167 0.63 -0.6 207,863 + H281DRAFT_03167 0.63 -0.5 207,863 + H281DRAFT_03167 0.63 -0.4 207,939 + H281DRAFT_03167 0.74 +0.4 208,220 + +0.2 208,244 - -0.0 208,246 + -0.0 208,246 + +0.5 208,246 + +0.0 208,246 + +0.1 208,246 + +1.1 208,246 + +0.1 208,247 - +0.1 208,247 - +1.4 208,247 - -0.3 208,247 - -0.2 208,248 + -0.4 208,249 - -0.8 208,249 - -0.9 208,282 + +0.5 208,282 + -2.7 208,283 - -0.3 208,297 + -0.3 208,297 + +1.4 208,298 - -1.5 208,298 - -0.8 208,298 - +1.3 208,319 + -0.1 208,393 + -4.0 208,393 + -1.5 208,394 - +0.2 208,394 - -0.4 208,469 + H281DRAFT_03168 0.12 -0.3 208,470 - H281DRAFT_03168 0.13 -2.2 208,551 + H281DRAFT_03168 0.20 -0.3 208,552 - H281DRAFT_03168 0.21 -0.3 208,707 - H281DRAFT_03168 0.36 -0.8 208,707 - H281DRAFT_03168 0.36 +0.6 208,839 + H281DRAFT_03168 0.48 -1.0 208,839 + H281DRAFT_03168 0.48 +0.1 208,839 + H281DRAFT_03168 0.48 -1.1 208,840 - H281DRAFT_03168 0.48 +0.7 208,841 + H281DRAFT_03168 0.49 -1.4 208,958 + H281DRAFT_03168 0.60 +0.1 208,958 + H281DRAFT_03168 0.60 +0.0 208,959 - H281DRAFT_03168 0.60 -1.7 209,025 - H281DRAFT_03168 0.66 -0.3 209,112 + H281DRAFT_03168 0.75 +1.6 209,112 + H281DRAFT_03168 0.75 +0.6 209,113 - H281DRAFT_03168 0.75 +0.2 209,214 - H281DRAFT_03168 0.85 -1.4 209,279 + +1.9 209,280 - +1.7 209,398 + +1.0 209,399 - -0.1 209,399 - +0.3 209,399 - -1.2 209,449 + +0.1 209,449 + +0.6 209,450 - -0.7 209,450 - -0.7 209,593 + H281DRAFT_03169 0.14 -0.9 209,626 + H281DRAFT_03169 0.16 +0.1 209,686 + H281DRAFT_03169 0.20 -1.2 209,753 - H281DRAFT_03169 0.25 -0.9 209,753 - H281DRAFT_03169 0.25 +0.2 209,917 + H281DRAFT_03169 0.36 +0.3 209,918 - H281DRAFT_03169 0.37 -0.6 209,950 + H281DRAFT_03169 0.39 +0.2 209,951 - H281DRAFT_03169 0.39 +0.8 210,060 + H281DRAFT_03169 0.46 +0.1 210,061 - H281DRAFT_03169 0.47 +0.3 210,061 - H281DRAFT_03169 0.47 +0.9 210,178 + +2.9 210,179 - H281DRAFT_03169 0.55 -2.4
Or see this region's nucleotide sequence