Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03146 and H281DRAFT_03147 are separated by 27 nucleotides H281DRAFT_03147 and H281DRAFT_03148 are separated by 225 nucleotides
H281DRAFT_03146: H281DRAFT_03146 - Predicted amidohydrolase, at 186,229 to 187,116
_03146
H281DRAFT_03147: H281DRAFT_03147 - FKBP-type peptidyl-prolyl cis-trans isomerase FkpA, at 187,144 to 187,545
_03147
H281DRAFT_03148: H281DRAFT_03148 - hypothetical protein, at 187,771 to 188,844
_03148
Position (kb) 187
188 Strain fitness (log2 ratio) -2
-1
0
1
2 at 186.151 kb on + strand at 186.152 kb on - strand at 186.152 kb on - strand at 186.225 kb on + strand at 186.226 kb on - strand at 186.320 kb on + strand, within H281DRAFT_03146 at 186.321 kb on - strand, within H281DRAFT_03146 at 186.595 kb on + strand, within H281DRAFT_03146 at 186.607 kb on + strand, within H281DRAFT_03146 at 186.607 kb on + strand, within H281DRAFT_03146 at 186.614 kb on - strand, within H281DRAFT_03146 at 186.807 kb on + strand, within H281DRAFT_03146 at 186.807 kb on + strand, within H281DRAFT_03146 at 186.844 kb on + strand, within H281DRAFT_03146 at 186.844 kb on + strand, within H281DRAFT_03146 at 186.845 kb on - strand, within H281DRAFT_03146 at 186.845 kb on - strand, within H281DRAFT_03146 at 186.845 kb on - strand, within H281DRAFT_03146 at 186.889 kb on - strand, within H281DRAFT_03146 at 186.919 kb on + strand, within H281DRAFT_03146 at 187.070 kb on + strand at 187.122 kb on - strand at 187.122 kb on - strand at 187.465 kb on + strand, within H281DRAFT_03147 at 187.535 kb on + strand at 187.605 kb on + strand at 187.801 kb on + strand at 187.803 kb on + strand at 187.867 kb on + strand at 187.867 kb on + strand at 187.991 kb on + strand, within H281DRAFT_03148 at 188.151 kb on + strand, within H281DRAFT_03148 at 188.152 kb on - strand, within H281DRAFT_03148 at 188.154 kb on + strand, within H281DRAFT_03148 at 188.155 kb on + strand, within H281DRAFT_03148 at 188.155 kb on + strand, within H281DRAFT_03148 at 188.156 kb on - strand, within H281DRAFT_03148 at 188.156 kb on - strand, within H281DRAFT_03148 at 188.164 kb on - strand, within H281DRAFT_03148 at 188.314 kb on - strand, within H281DRAFT_03148 at 188.418 kb on + strand, within H281DRAFT_03148
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 186,151 + +1.3 186,152 - +0.2 186,152 - -0.9 186,225 + -0.2 186,226 - +0.4 186,320 + H281DRAFT_03146 0.10 +0.4 186,321 - H281DRAFT_03146 0.10 +0.4 186,595 + H281DRAFT_03146 0.41 +1.7 186,607 + H281DRAFT_03146 0.43 +2.1 186,607 + H281DRAFT_03146 0.43 -0.1 186,614 - H281DRAFT_03146 0.43 -0.0 186,807 + H281DRAFT_03146 0.65 +0.7 186,807 + H281DRAFT_03146 0.65 +0.1 186,844 + H281DRAFT_03146 0.69 -0.6 186,844 + H281DRAFT_03146 0.69 +0.5 186,845 - H281DRAFT_03146 0.69 +0.7 186,845 - H281DRAFT_03146 0.69 +0.1 186,845 - H281DRAFT_03146 0.69 +0.3 186,889 - H281DRAFT_03146 0.74 -0.1 186,919 + H281DRAFT_03146 0.78 -1.0 187,070 + -1.1 187,122 - +0.7 187,122 - -0.6 187,465 + H281DRAFT_03147 0.80 +0.9 187,535 + -0.1 187,605 + -1.1 187,801 + +0.3 187,803 + -0.2 187,867 + +0.0 187,867 + -0.6 187,991 + H281DRAFT_03148 0.20 +0.2 188,151 + H281DRAFT_03148 0.35 -0.4 188,152 - H281DRAFT_03148 0.35 -1.1 188,154 + H281DRAFT_03148 0.36 +0.8 188,155 + H281DRAFT_03148 0.36 +0.4 188,155 + H281DRAFT_03148 0.36 +0.3 188,156 - H281DRAFT_03148 0.36 -1.8 188,156 - H281DRAFT_03148 0.36 +0.4 188,164 - H281DRAFT_03148 0.37 +0.5 188,314 - H281DRAFT_03148 0.51 -1.1 188,418 + H281DRAFT_03148 0.60 -1.7
Or see this region's nucleotide sequence