Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03138 and H281DRAFT_03139 are separated by 401 nucleotides H281DRAFT_03139 and H281DRAFT_03140 are separated by 210 nucleotides H281DRAFT_03140 and H281DRAFT_03141 are separated by 82 nucleotides
H281DRAFT_03138: H281DRAFT_03138 - Outer membrane protein (porin), at 174,712 to 175,914
_03138
H281DRAFT_03139: H281DRAFT_03139 - membrane protein, at 176,316 to 177,641
_03139
H281DRAFT_03140: H281DRAFT_03140 - Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC, at 177,852 to 178,391
_03140
H281DRAFT_03141: H281DRAFT_03141 - sulfate permease, SulP family, at 178,474 to 179,961
_03141
Position (kb)
176
177
178 Strain fitness (log2 ratio)
-2
-1
0
1 at 175.598 kb on + strand, within H281DRAFT_03138 at 175.802 kb on + strand at 175.937 kb on - strand at 175.937 kb on - strand at 175.941 kb on + strand at 175.941 kb on + strand at 175.942 kb on - strand at 175.942 kb on - strand at 175.962 kb on + strand at 175.963 kb on - strand at 175.963 kb on - strand at 176.038 kb on + strand at 176.039 kb on - strand at 176.039 kb on - strand at 176.043 kb on - strand at 176.043 kb on - strand at 176.098 kb on + strand at 176.166 kb on + strand at 176.422 kb on + strand at 176.422 kb on + strand at 176.909 kb on - strand, within H281DRAFT_03139 at 177.082 kb on + strand, within H281DRAFT_03139 at 177.224 kb on + strand, within H281DRAFT_03139 at 177.225 kb on - strand, within H281DRAFT_03139 at 177.225 kb on - strand, within H281DRAFT_03139 at 177.225 kb on - strand, within H281DRAFT_03139 at 177.254 kb on + strand, within H281DRAFT_03139 at 177.255 kb on - strand, within H281DRAFT_03139 at 177.661 kb on - strand at 177.747 kb on + strand at 177.747 kb on + strand at 177.748 kb on - strand at 177.748 kb on - strand at 177.749 kb on + strand at 177.750 kb on - strand at 177.750 kb on - strand at 177.811 kb on + strand at 177.827 kb on - strand at 177.835 kb on + strand at 177.835 kb on + strand at 177.836 kb on - strand at 177.836 kb on - strand at 177.836 kb on - strand at 177.842 kb on - strand at 177.842 kb on - strand at 178.040 kb on + strand, within H281DRAFT_03140 at 178.041 kb on - strand, within H281DRAFT_03140 at 178.041 kb on - strand, within H281DRAFT_03140 at 178.057 kb on - strand, within H281DRAFT_03140 at 178.080 kb on + strand, within H281DRAFT_03140 at 178.080 kb on + strand, within H281DRAFT_03140 at 178.080 kb on + strand, within H281DRAFT_03140 at 178.081 kb on - strand, within H281DRAFT_03140 at 178.218 kb on - strand, within H281DRAFT_03140 at 178.516 kb on - strand at 178.516 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 175,598 + H281DRAFT_03138 0.74 -1.2 175,802 + -0.6 175,937 - -0.1 175,937 - -0.0 175,941 + -1.3 175,941 + -0.4 175,942 - +0.9 175,942 - -0.2 175,962 + -0.4 175,963 - +0.6 175,963 - -0.8 176,038 + +0.4 176,039 - +0.1 176,039 - +0.1 176,043 - +1.1 176,043 - +0.1 176,098 + +1.1 176,166 + -1.0 176,422 + +0.4 176,422 + +0.0 176,909 - H281DRAFT_03139 0.45 +0.4 177,082 + H281DRAFT_03139 0.58 -0.2 177,224 + H281DRAFT_03139 0.68 -1.9 177,225 - H281DRAFT_03139 0.69 -0.0 177,225 - H281DRAFT_03139 0.69 -1.4 177,225 - H281DRAFT_03139 0.69 -0.6 177,254 + H281DRAFT_03139 0.71 -2.0 177,255 - H281DRAFT_03139 0.71 -1.4 177,661 - +0.9 177,747 + +0.6 177,747 + +0.9 177,748 - +0.6 177,748 - +0.1 177,749 + +0.3 177,750 - +0.1 177,750 - -0.7 177,811 + -0.0 177,827 - +0.2 177,835 + -0.5 177,835 + -0.0 177,836 - +0.7 177,836 - +0.8 177,836 - +0.7 177,842 - +0.1 177,842 - -0.3 178,040 + H281DRAFT_03140 0.35 -0.4 178,041 - H281DRAFT_03140 0.35 -0.2 178,041 - H281DRAFT_03140 0.35 +0.1 178,057 - H281DRAFT_03140 0.38 -1.2 178,080 + H281DRAFT_03140 0.42 -0.4 178,080 + H281DRAFT_03140 0.42 +0.4 178,080 + H281DRAFT_03140 0.42 -1.1 178,081 - H281DRAFT_03140 0.42 +0.1 178,218 - H281DRAFT_03140 0.68 -0.5 178,516 - -1.5 178,516 - -0.7
Or see this region's nucleotide sequence