Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03136 and H281DRAFT_03137 are separated by 283 nucleotides H281DRAFT_03137 and H281DRAFT_03138 are separated by 268 nucleotides
H281DRAFT_03136: H281DRAFT_03136 - Transglutaminase-like enzyme, putative cysteine protease, at 172,487 to 173,287
_03136
H281DRAFT_03137: H281DRAFT_03137 - putative proteasome-type protease, at 173,571 to 174,443
_03137
H281DRAFT_03138: H281DRAFT_03138 - Outer membrane protein (porin), at 174,712 to 175,914
_03138
Position (kb) 173
174
175 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 172.646 kb on + strand, within H281DRAFT_03136 at 172.663 kb on + strand, within H281DRAFT_03136 at 172.664 kb on - strand, within H281DRAFT_03136 at 172.688 kb on - strand, within H281DRAFT_03136 at 172.910 kb on + strand, within H281DRAFT_03136 at 172.911 kb on - strand, within H281DRAFT_03136 at 173.048 kb on + strand, within H281DRAFT_03136 at 173.049 kb on - strand, within H281DRAFT_03136 at 173.192 kb on + strand, within H281DRAFT_03136 at 173.325 kb on + strand at 173.528 kb on + strand at 173.529 kb on - strand at 173.570 kb on + strand at 173.571 kb on - strand at 173.577 kb on + strand at 173.577 kb on + strand at 173.577 kb on + strand at 173.578 kb on - strand at 173.584 kb on + strand at 173.585 kb on - strand at 173.585 kb on - strand at 173.958 kb on + strand, within H281DRAFT_03137 at 173.959 kb on - strand, within H281DRAFT_03137 at 174.159 kb on + strand, within H281DRAFT_03137 at 174.217 kb on - strand, within H281DRAFT_03137 at 174.217 kb on - strand, within H281DRAFT_03137 at 174.441 kb on + strand at 174.514 kb on + strand at 174.514 kb on + strand at 174.514 kb on + strand at 174.514 kb on + strand at 174.515 kb on - strand at 174.710 kb on + strand at 174.710 kb on + strand at 174.710 kb on + strand at 174.710 kb on + strand at 174.710 kb on + strand at 174.777 kb on - strand at 174.777 kb on - strand at 174.920 kb on + strand, within H281DRAFT_03138 at 174.921 kb on - strand, within H281DRAFT_03138 at 174.954 kb on - strand, within H281DRAFT_03138 at 175.077 kb on + strand, within H281DRAFT_03138 at 175.078 kb on - strand, within H281DRAFT_03138 at 175.078 kb on - strand, within H281DRAFT_03138 at 175.113 kb on - strand, within H281DRAFT_03138 at 175.113 kb on - strand, within H281DRAFT_03138 at 175.117 kb on + strand, within H281DRAFT_03138
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 172,646 + H281DRAFT_03136 0.20 -0.8 172,663 + H281DRAFT_03136 0.22 -0.4 172,664 - H281DRAFT_03136 0.22 +1.3 172,688 - H281DRAFT_03136 0.25 +1.9 172,910 + H281DRAFT_03136 0.53 +0.3 172,911 - H281DRAFT_03136 0.53 +0.2 173,048 + H281DRAFT_03136 0.70 -1.6 173,049 - H281DRAFT_03136 0.70 -1.3 173,192 + H281DRAFT_03136 0.88 -1.6 173,325 + -0.0 173,528 + +0.7 173,529 - +1.1 173,570 + -0.0 173,571 - +1.1 173,577 + -1.3 173,577 + +0.3 173,577 + +0.0 173,578 - -0.6 173,584 + +0.2 173,585 - -0.7 173,585 - -0.0 173,958 + H281DRAFT_03137 0.44 +0.7 173,959 - H281DRAFT_03137 0.44 +0.9 174,159 + H281DRAFT_03137 0.67 -0.3 174,217 - H281DRAFT_03137 0.74 +0.9 174,217 - H281DRAFT_03137 0.74 +0.2 174,441 + -0.2 174,514 + -0.4 174,514 + -0.2 174,514 + +1.5 174,514 + -0.1 174,515 - +0.0 174,710 + -0.8 174,710 + -0.5 174,710 + +0.4 174,710 + +0.5 174,710 + -0.5 174,777 - -0.4 174,777 - -2.1 174,920 + H281DRAFT_03138 0.17 -3.8 174,921 - H281DRAFT_03138 0.17 -0.6 174,954 - H281DRAFT_03138 0.20 -1.2 175,077 + H281DRAFT_03138 0.30 +0.1 175,078 - H281DRAFT_03138 0.30 -1.4 175,078 - H281DRAFT_03138 0.30 -0.7 175,113 - H281DRAFT_03138 0.33 -0.2 175,113 - H281DRAFT_03138 0.33 -0.4 175,117 + H281DRAFT_03138 0.34 -1.6
Or see this region's nucleotide sequence