Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03040 and H281DRAFT_03041 are separated by 23 nucleotides H281DRAFT_03041 and H281DRAFT_03042 are separated by 253 nucleotides
H281DRAFT_03040: H281DRAFT_03040 - Uncharacterized conserved protein, DUF2252 family, at 70,374 to 71,786
_03040
H281DRAFT_03041: H281DRAFT_03041 - Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family, at 71,810 to 72,664
_03041
H281DRAFT_03042: H281DRAFT_03042 - NADP-dependent 3-hydroxy acid dehydrogenase YdfG, at 72,918 to 73,682
_03042
Position (kb) 71
72
73 Strain fitness (log2 ratio) -1
0
1 at 70.870 kb on - strand, within H281DRAFT_03040 at 71.149 kb on + strand, within H281DRAFT_03040 at 71.173 kb on - strand, within H281DRAFT_03040 at 71.361 kb on + strand, within H281DRAFT_03040 at 71.476 kb on - strand, within H281DRAFT_03040 at 71.478 kb on + strand, within H281DRAFT_03040 at 71.478 kb on + strand, within H281DRAFT_03040 at 71.479 kb on - strand, within H281DRAFT_03040 at 71.626 kb on - strand, within H281DRAFT_03040 at 71.626 kb on - strand, within H281DRAFT_03040 at 71.627 kb on + strand, within H281DRAFT_03040 at 71.668 kb on - strand at 71.679 kb on + strand at 71.704 kb on - strand at 71.873 kb on + strand at 71.873 kb on + strand at 71.952 kb on - strand, within H281DRAFT_03041 at 72.045 kb on - strand, within H281DRAFT_03041 at 72.296 kb on + strand, within H281DRAFT_03041 at 72.310 kb on + strand, within H281DRAFT_03041 at 72.483 kb on - strand, within H281DRAFT_03041 at 72.664 kb on + strand at 72.665 kb on - strand at 72.836 kb on - strand at 73.011 kb on + strand, within H281DRAFT_03042 at 73.014 kb on - strand, within H281DRAFT_03042 at 73.344 kb on - strand, within H281DRAFT_03042
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 70,870 - H281DRAFT_03040 0.35 -0.2 71,149 + H281DRAFT_03040 0.55 -0.1 71,173 - H281DRAFT_03040 0.57 -0.1 71,361 + H281DRAFT_03040 0.70 -0.8 71,476 - H281DRAFT_03040 0.78 +0.9 71,478 + H281DRAFT_03040 0.78 -0.6 71,478 + H281DRAFT_03040 0.78 -0.4 71,479 - H281DRAFT_03040 0.78 +0.1 71,626 - H281DRAFT_03040 0.89 +0.9 71,626 - H281DRAFT_03040 0.89 -0.8 71,627 + H281DRAFT_03040 0.89 +0.5 71,668 - +1.1 71,679 + +0.4 71,704 - +0.7 71,873 + +0.9 71,873 + -1.1 71,952 - H281DRAFT_03041 0.17 -0.3 72,045 - H281DRAFT_03041 0.27 +1.1 72,296 + H281DRAFT_03041 0.57 +0.7 72,310 + H281DRAFT_03041 0.58 +1.1 72,483 - H281DRAFT_03041 0.79 +0.4 72,664 + +0.2 72,665 - +0.6 72,836 - -0.0 73,011 + H281DRAFT_03042 0.12 -1.4 73,014 - H281DRAFT_03042 0.13 -0.4 73,344 - H281DRAFT_03042 0.56 -0.6
Or see this region's nucleotide sequence