Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03004 and H281DRAFT_03005 are separated by 356 nucleotides H281DRAFT_03005 and H281DRAFT_03006 overlap by 23 nucleotides
H281DRAFT_03004: H281DRAFT_03004 - MFS transporter, MHS family, shikimate and dehydroshikimate transport protein, at 29,143 to 30,459
_03004
H281DRAFT_03005: H281DRAFT_03005 - hypothetical protein, at 30,816 to 31,034
_03005
H281DRAFT_03006: H281DRAFT_03006 - transcriptional regulator, GntR family, at 31,012 to 31,731
_03006
Position (kb)
30
31
32 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 29.821 kb on + strand at 29.975 kb on + strand, within H281DRAFT_03004 at 30.118 kb on + strand, within H281DRAFT_03004 at 30.118 kb on + strand, within H281DRAFT_03004 at 30.118 kb on + strand, within H281DRAFT_03004 at 30.119 kb on - strand, within H281DRAFT_03004 at 30.121 kb on + strand, within H281DRAFT_03004 at 30.169 kb on + strand, within H281DRAFT_03004 at 30.169 kb on + strand, within H281DRAFT_03004 at 30.289 kb on + strand, within H281DRAFT_03004 at 30.459 kb on + strand at 30.460 kb on - strand at 30.510 kb on + strand at 30.510 kb on + strand at 30.551 kb on + strand at 30.551 kb on + strand at 30.552 kb on - strand at 30.554 kb on + strand at 30.554 kb on + strand at 30.591 kb on - strand at 30.640 kb on + strand at 30.643 kb on - strand at 30.663 kb on - strand at 30.663 kb on - strand at 30.697 kb on + strand at 30.698 kb on - strand at 30.702 kb on + strand at 30.738 kb on + strand at 30.775 kb on - strand at 30.986 kb on + strand, within H281DRAFT_03005 at 30.986 kb on + strand, within H281DRAFT_03005 at 30.986 kb on + strand, within H281DRAFT_03005 at 30.987 kb on - strand, within H281DRAFT_03005 at 30.987 kb on - strand, within H281DRAFT_03005 at 31.064 kb on + strand at 31.064 kb on + strand at 31.105 kb on + strand, within H281DRAFT_03006 at 31.144 kb on + strand, within H281DRAFT_03006 at 31.144 kb on + strand, within H281DRAFT_03006 at 31.145 kb on - strand, within H281DRAFT_03006 at 31.282 kb on + strand, within H281DRAFT_03006 at 31.536 kb on + strand, within H281DRAFT_03006 at 31.616 kb on + strand, within H281DRAFT_03006 at 31.616 kb on + strand, within H281DRAFT_03006 at 31.737 kb on + strand at 31.737 kb on + strand at 31.737 kb on + strand at 31.738 kb on - strand at 31.738 kb on - strand at 31.897 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 29,821 + +0.9 29,975 + H281DRAFT_03004 0.63 -0.7 30,118 + H281DRAFT_03004 0.74 -0.2 30,118 + H281DRAFT_03004 0.74 -0.9 30,118 + H281DRAFT_03004 0.74 -1.2 30,119 - H281DRAFT_03004 0.74 +1.0 30,121 + H281DRAFT_03004 0.74 +0.3 30,169 + H281DRAFT_03004 0.78 -0.4 30,169 + H281DRAFT_03004 0.78 -1.2 30,289 + H281DRAFT_03004 0.87 -1.0 30,459 + -0.3 30,460 - -0.5 30,510 + +0.5 30,510 + -0.6 30,551 + -0.0 30,551 + -0.3 30,552 - -0.4 30,554 + -1.1 30,554 + +0.8 30,591 - +0.6 30,640 + +0.9 30,643 - -0.4 30,663 - +0.9 30,663 - +0.9 30,697 + +1.7 30,698 - +0.3 30,702 + +0.2 30,738 + -0.5 30,775 - -0.7 30,986 + H281DRAFT_03005 0.78 +2.1 30,986 + H281DRAFT_03005 0.78 -0.0 30,986 + H281DRAFT_03005 0.78 -1.3 30,987 - H281DRAFT_03005 0.78 -0.7 30,987 - H281DRAFT_03005 0.78 -0.8 31,064 + -0.5 31,064 + -1.2 31,105 + H281DRAFT_03006 0.13 +0.0 31,144 + H281DRAFT_03006 0.18 -0.5 31,144 + H281DRAFT_03006 0.18 -1.4 31,145 - H281DRAFT_03006 0.18 -3.3 31,282 + H281DRAFT_03006 0.38 +1.2 31,536 + H281DRAFT_03006 0.73 -2.5 31,616 + H281DRAFT_03006 0.84 -1.2 31,616 + H281DRAFT_03006 0.84 -2.1 31,737 + +1.4 31,737 + -0.1 31,737 + +0.5 31,738 - +1.1 31,738 - -0.0 31,897 + -1.4
Or see this region's nucleotide sequence