Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02902 and H281DRAFT_02903 are separated by 57 nucleotides H281DRAFT_02903 and H281DRAFT_02904 overlap by 14 nucleotides
H281DRAFT_02902: H281DRAFT_02902 - VRR-NUC domain-containing protein, at 509,752 to 511,575
_02902
H281DRAFT_02903: H281DRAFT_02903 - L-lactate dehydrogenase complex protein LldG, at 511,633 to 512,220
_02903
H281DRAFT_02904: H281DRAFT_02904 - L-lactate dehydrogenase complex protein LldF, at 512,207 to 513,598
_02904
Position (kb) 511
512
513 Strain fitness (log2 ratio) -1
0
1
2
3 at 510.952 kb on + strand, within H281DRAFT_02902 at 511.157 kb on - strand, within H281DRAFT_02902 at 511.157 kb on - strand, within H281DRAFT_02902 at 511.294 kb on + strand, within H281DRAFT_02902 at 511.529 kb on + strand at 511.532 kb on + strand at 511.533 kb on - strand at 511.602 kb on - strand at 511.839 kb on - strand, within H281DRAFT_02903 at 512.302 kb on + strand at 512.303 kb on - strand at 512.303 kb on - strand at 512.473 kb on + strand, within H281DRAFT_02904 at 512.474 kb on - strand, within H281DRAFT_02904 at 512.476 kb on - strand, within H281DRAFT_02904 at 512.615 kb on - strand, within H281DRAFT_02904 at 512.622 kb on + strand, within H281DRAFT_02904 at 512.623 kb on - strand, within H281DRAFT_02904 at 512.796 kb on + strand, within H281DRAFT_02904 at 513.035 kb on - strand, within H281DRAFT_02904 at 513.035 kb on - strand, within H281DRAFT_02904 at 513.060 kb on + strand, within H281DRAFT_02904 at 513.061 kb on - strand, within H281DRAFT_02904 at 513.073 kb on + strand, within H281DRAFT_02904 at 513.217 kb on + strand, within H281DRAFT_02904
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 510,952 + H281DRAFT_02902 0.66 -0.5 511,157 - H281DRAFT_02902 0.77 -0.4 511,157 - H281DRAFT_02902 0.77 -1.1 511,294 + H281DRAFT_02902 0.85 +0.3 511,529 + -0.4 511,532 + +0.1 511,533 - +0.5 511,602 - +3.0 511,839 - H281DRAFT_02903 0.35 -1.0 512,302 + -0.4 512,303 - +0.4 512,303 - -0.4 512,473 + H281DRAFT_02904 0.19 +1.2 512,474 - H281DRAFT_02904 0.19 -0.7 512,476 - H281DRAFT_02904 0.19 +1.2 512,615 - H281DRAFT_02904 0.29 +0.9 512,622 + H281DRAFT_02904 0.30 +0.3 512,623 - H281DRAFT_02904 0.30 +0.0 512,796 + H281DRAFT_02904 0.42 +0.6 513,035 - H281DRAFT_02904 0.59 -0.9 513,035 - H281DRAFT_02904 0.59 +0.9 513,060 + H281DRAFT_02904 0.61 -0.4 513,061 - H281DRAFT_02904 0.61 +0.6 513,073 + H281DRAFT_02904 0.62 -0.7 513,217 + H281DRAFT_02904 0.73 +0.5
Or see this region's nucleotide sequence