Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02738

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02737 and H281DRAFT_02738 are separated by 111 nucleotidesH281DRAFT_02738 and H281DRAFT_02739 are separated by 105 nucleotidesH281DRAFT_02739 and H281DRAFT_02740 are separated by 18 nucleotides H281DRAFT_02737: H281DRAFT_02737 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, at 320,968 to 322,365 _02737 H281DRAFT_02738: H281DRAFT_02738 - molybdate transport system substrate-binding protein, at 322,477 to 323,265 _02738 H281DRAFT_02739: H281DRAFT_02739 - transcriptional regulator, IclR family, at 323,371 to 324,222 _02739 H281DRAFT_02740: H281DRAFT_02740 - MFS transporter, ACS family, phthalate transporter, at 324,241 to 325,575 _02740 Position (kb) 322 323 324Strain fitness (log2 ratio) -1 0 1at 321.522 kb on + strand, within H281DRAFT_02737at 321.850 kb on + strand, within H281DRAFT_02737at 322.016 kb on - strand, within H281DRAFT_02737at 322.637 kb on + strand, within H281DRAFT_02738at 322.638 kb on - strand, within H281DRAFT_02738at 322.800 kb on + strand, within H281DRAFT_02738at 323.198 kb on - strandat 324.147 kb on - strandat 324.159 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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321,522 + H281DRAFT_02737 0.40 -0.2
321,850 + H281DRAFT_02737 0.63 -1.7
322,016 - H281DRAFT_02737 0.75 +0.4
322,637 + H281DRAFT_02738 0.20 -1.3
322,638 - H281DRAFT_02738 0.20 -0.0
322,800 + H281DRAFT_02738 0.41 -1.3
323,198 - +0.6
324,147 - -0.2
324,159 - -0.6

Or see this region's nucleotide sequence