Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02736

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02735 and H281DRAFT_02736 are separated by 111 nucleotidesH281DRAFT_02736 and H281DRAFT_02737 are separated by 151 nucleotides H281DRAFT_02735: H281DRAFT_02735 - AraC family transcriptional regulator, activator of mtrCDE, at 319,203 to 320,165 _02735 H281DRAFT_02736: H281DRAFT_02736 - uncharacterized peroxidase-related enzyme, at 320,277 to 320,816 _02736 H281DRAFT_02737: H281DRAFT_02737 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, at 320,968 to 322,365 _02737 Position (kb) 320 321Strain fitness (log2 ratio) -2 -1 0 1at 319.768 kb on + strand, within H281DRAFT_02735at 319.847 kb on + strand, within H281DRAFT_02735at 320.062 kb on + strand, within H281DRAFT_02735at 320.086 kb on + strandat 320.165 kb on + strandat 320.165 kb on + strandat 320.165 kb on + strandat 320.166 kb on - strandat 320.335 kb on - strand, within H281DRAFT_02736at 320.518 kb on - strand, within H281DRAFT_02736at 320.765 kb on + strandat 320.826 kb on - strandat 321.069 kb on - strandat 321.134 kb on + strand, within H281DRAFT_02737at 321.522 kb on + strand, within H281DRAFT_02737

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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319,768 + H281DRAFT_02735 0.59 -1.9
319,847 + H281DRAFT_02735 0.67 +0.0
320,062 + H281DRAFT_02735 0.89 -0.3
320,086 + -1.1
320,165 + +0.9
320,165 + +0.9
320,165 + -0.2
320,166 - -0.4
320,335 - H281DRAFT_02736 0.11 +0.5
320,518 - H281DRAFT_02736 0.45 +1.1
320,765 + +0.9
320,826 - -1.8
321,069 - +0.8
321,134 + H281DRAFT_02737 0.12 -1.1
321,522 + H281DRAFT_02737 0.40 -0.2

Or see this region's nucleotide sequence