Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02589 and H281DRAFT_02590 overlap by 41 nucleotides H281DRAFT_02590 and H281DRAFT_02591 are separated by 97 nucleotides H281DRAFT_02591 and H281DRAFT_02592 are separated by 216 nucleotides H281DRAFT_02592 and H281DRAFT_02593 are separated by 146 nucleotides
H281DRAFT_02589: H281DRAFT_02589 - hypothetical protein, at 163,449 to 164,057
_02589
H281DRAFT_02590: H281DRAFT_02590 - Quinol monooxygenase YgiN, at 164,017 to 164,319
_02590
H281DRAFT_02591: H281DRAFT_02591 - hypothetical protein, at 164,417 to 164,521
_02591
H281DRAFT_02592: H281DRAFT_02592 - fumarase, class II, at 164,738 to 166,126
_02592
H281DRAFT_02593: H281DRAFT_02593 - aerobic C4-dicarboxylate transport protein, at 166,273 to 167,661
_02593
Position (kb) 164
165
166
167 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 163.920 kb on + strand, within H281DRAFT_02589 at 164.041 kb on + strand at 164.367 kb on + strand at 164.367 kb on + strand at 164.368 kb on - strand at 164.368 kb on - strand at 164.448 kb on - strand, within H281DRAFT_02591 at 164.448 kb on - strand, within H281DRAFT_02591 at 164.449 kb on + strand, within H281DRAFT_02591 at 164.450 kb on - strand, within H281DRAFT_02591 at 164.562 kb on + strand at 164.740 kb on - strand at 165.030 kb on + strand, within H281DRAFT_02592 at 165.290 kb on + strand, within H281DRAFT_02592 at 165.635 kb on + strand, within H281DRAFT_02592 at 166.085 kb on - strand at 166.411 kb on + strand at 166.661 kb on - strand, within H281DRAFT_02593 at 166.668 kb on - strand, within H281DRAFT_02593
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 163,920 + H281DRAFT_02589 0.77 -1.2 164,041 + -1.4 164,367 + -0.0 164,367 + -1.1 164,368 - -0.8 164,368 - -0.2 164,448 - H281DRAFT_02591 0.30 +0.1 164,448 - H281DRAFT_02591 0.30 -0.4 164,449 + H281DRAFT_02591 0.30 +0.1 164,450 - H281DRAFT_02591 0.31 -0.0 164,562 + +0.0 164,740 - +0.9 165,030 + H281DRAFT_02592 0.21 -1.7 165,290 + H281DRAFT_02592 0.40 -1.2 165,635 + H281DRAFT_02592 0.65 -1.0 166,085 - -0.5 166,411 + -3.7 166,661 - H281DRAFT_02593 0.28 -0.0 166,668 - H281DRAFT_02593 0.28 +0.6
Or see this region's nucleotide sequence