Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02582 and H281DRAFT_02583 are separated by 544 nucleotides H281DRAFT_02583 and H281DRAFT_02584 overlap by 4 nucleotides H281DRAFT_02584 and H281DRAFT_02585 overlap by 19 nucleotides H281DRAFT_02585 and H281DRAFT_02586 are separated by 127 nucleotides
H281DRAFT_02582: H281DRAFT_02582 - Arabinose efflux permease, at 156,557 to 157,957
_02582
H281DRAFT_02583: H281DRAFT_02583 - DNA-binding protein HU-beta, at 158,502 to 158,729
_02583
H281DRAFT_02584: H281DRAFT_02584 - hypothetical protein, at 158,726 to 158,845
_02584
H281DRAFT_02585: H281DRAFT_02585 - FAD/FMN-containing dehydrogenase, at 158,827 to 160,212
_02585
H281DRAFT_02586: H281DRAFT_02586 - Cytochrome c, mono- and diheme variants, at 160,340 to 161,176
_02586
Position (kb) 158
159
160
161 Strain fitness (log2 ratio) -1
0
1
2 at 158.262 kb on + strand at 158.344 kb on - strand at 158.344 kb on - strand at 158.475 kb on + strand at 158.804 kb on + strand, within H281DRAFT_02584 at 158.915 kb on + strand at 159.295 kb on + strand, within H281DRAFT_02585 at 159.599 kb on - strand, within H281DRAFT_02585 at 159.652 kb on + strand, within H281DRAFT_02585 at 159.857 kb on - strand, within H281DRAFT_02585 at 159.942 kb on - strand, within H281DRAFT_02585 at 159.942 kb on - strand, within H281DRAFT_02585 at 159.953 kb on - strand at 159.953 kb on - strand, within H281DRAFT_02585 at 159.982 kb on - strand, within H281DRAFT_02585 at 160.050 kb on - strand, within H281DRAFT_02585 at 160.211 kb on - strand at 160.366 kb on + strand at 160.368 kb on + strand at 160.369 kb on - strand at 160.883 kb on + strand, within H281DRAFT_02586 at 160.946 kb on - strand, within H281DRAFT_02586 at 160.993 kb on + strand, within H281DRAFT_02586 at 160.999 kb on - strand, within H281DRAFT_02586 at 161.084 kb on + strand, within H281DRAFT_02586
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 158,262 + -0.3 158,344 - +0.8 158,344 - -0.6 158,475 + -0.6 158,804 + H281DRAFT_02584 0.65 +0.2 158,915 + -0.3 159,295 + H281DRAFT_02585 0.34 -0.4 159,599 - H281DRAFT_02585 0.56 -1.7 159,652 + H281DRAFT_02585 0.60 +0.7 159,857 - H281DRAFT_02585 0.74 +0.5 159,942 - H281DRAFT_02585 0.80 +1.3 159,942 - H281DRAFT_02585 0.80 -0.2 159,953 - +2.6 159,953 - H281DRAFT_02585 0.81 +0.2 159,982 - H281DRAFT_02585 0.83 +0.5 160,050 - H281DRAFT_02585 0.88 -0.4 160,211 - -0.5 160,366 + -0.7 160,368 + -0.2 160,369 - -0.8 160,883 + H281DRAFT_02586 0.65 -0.5 160,946 - H281DRAFT_02586 0.72 +0.5 160,993 + H281DRAFT_02586 0.78 +0.1 160,999 - H281DRAFT_02586 0.79 -0.5 161,084 + H281DRAFT_02586 0.89 +1.0
Or see this region's nucleotide sequence