Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02348 and H281DRAFT_02349 are separated by 1 nucleotides H281DRAFT_02349 and H281DRAFT_02350 overlap by 23 nucleotides H281DRAFT_02350 and H281DRAFT_02351 are separated by 1 nucleotides H281DRAFT_02351 and H281DRAFT_02352 are separated by 98 nucleotides
H281DRAFT_02348: H281DRAFT_02348 - general secretion pathway protein K, at 506,776 to 507,966
_02348
H281DRAFT_02349: H281DRAFT_02349 - general secretion pathway protein J, at 507,968 to 508,645
_02349
H281DRAFT_02350: H281DRAFT_02350 - general secretion pathway protein I, at 508,623 to 509,036
_02350
H281DRAFT_02351: H281DRAFT_02351 - general secretion pathway protein H, at 509,038 to 509,520
_02351
H281DRAFT_02352: H281DRAFT_02352 - general secretion pathway protein G, at 509,619 to 510,083
_02352
Position (kb) 507
508
509 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 507.247 kb on - strand, within H281DRAFT_02348 at 507.416 kb on + strand, within H281DRAFT_02348 at 507.416 kb on + strand, within H281DRAFT_02348 at 507.416 kb on + strand, within H281DRAFT_02348 at 507.417 kb on - strand, within H281DRAFT_02348 at 507.524 kb on + strand, within H281DRAFT_02348 at 507.524 kb on + strand, within H281DRAFT_02348 at 507.524 kb on + strand, within H281DRAFT_02348 at 507.525 kb on - strand, within H281DRAFT_02348 at 507.623 kb on + strand, within H281DRAFT_02348 at 507.623 kb on + strand, within H281DRAFT_02348 at 507.623 kb on + strand, within H281DRAFT_02348 at 507.624 kb on - strand, within H281DRAFT_02348 at 507.624 kb on - strand, within H281DRAFT_02348 at 507.624 kb on - strand, within H281DRAFT_02348 at 507.627 kb on + strand, within H281DRAFT_02348 at 507.628 kb on - strand, within H281DRAFT_02348 at 507.628 kb on - strand, within H281DRAFT_02348 at 507.642 kb on + strand, within H281DRAFT_02348 at 507.760 kb on + strand, within H281DRAFT_02348 at 507.760 kb on + strand, within H281DRAFT_02348 at 507.761 kb on - strand, within H281DRAFT_02348 at 507.761 kb on - strand, within H281DRAFT_02348 at 507.797 kb on - strand, within H281DRAFT_02348 at 507.946 kb on - strand at 508.158 kb on + strand, within H281DRAFT_02349 at 508.158 kb on + strand, within H281DRAFT_02349 at 508.244 kb on + strand, within H281DRAFT_02349 at 508.349 kb on + strand, within H281DRAFT_02349 at 508.349 kb on + strand, within H281DRAFT_02349 at 508.349 kb on + strand, within H281DRAFT_02349 at 508.350 kb on - strand, within H281DRAFT_02349 at 508.823 kb on + strand at 508.823 kb on + strand, within H281DRAFT_02350 at 508.823 kb on + strand, within H281DRAFT_02350 at 508.823 kb on + strand at 508.824 kb on - strand, within H281DRAFT_02350 at 508.824 kb on - strand, within H281DRAFT_02350 at 508.824 kb on - strand, within H281DRAFT_02350 at 508.911 kb on + strand, within H281DRAFT_02350 at 509.143 kb on + strand, within H281DRAFT_02351 at 509.144 kb on - strand, within H281DRAFT_02351 at 509.144 kb on - strand, within H281DRAFT_02351 at 509.620 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 507,247 - H281DRAFT_02348 0.40 +0.6 507,416 + H281DRAFT_02348 0.54 +0.3 507,416 + H281DRAFT_02348 0.54 +1.7 507,416 + H281DRAFT_02348 0.54 -0.6 507,417 - H281DRAFT_02348 0.54 +0.6 507,524 + H281DRAFT_02348 0.63 -0.2 507,524 + H281DRAFT_02348 0.63 +0.8 507,524 + H281DRAFT_02348 0.63 -1.4 507,525 - H281DRAFT_02348 0.63 -0.2 507,623 + H281DRAFT_02348 0.71 +0.2 507,623 + H281DRAFT_02348 0.71 +0.9 507,623 + H281DRAFT_02348 0.71 +0.7 507,624 - H281DRAFT_02348 0.71 +0.2 507,624 - H281DRAFT_02348 0.71 +3.5 507,624 - H281DRAFT_02348 0.71 +0.4 507,627 + H281DRAFT_02348 0.71 +0.9 507,628 - H281DRAFT_02348 0.72 +0.9 507,628 - H281DRAFT_02348 0.72 +1.0 507,642 + H281DRAFT_02348 0.73 -0.5 507,760 + H281DRAFT_02348 0.83 +0.4 507,760 + H281DRAFT_02348 0.83 +0.9 507,761 - H281DRAFT_02348 0.83 +0.7 507,761 - H281DRAFT_02348 0.83 -2.6 507,797 - H281DRAFT_02348 0.86 +0.3 507,946 - -0.0 508,158 + H281DRAFT_02349 0.28 +0.7 508,158 + H281DRAFT_02349 0.28 +0.1 508,244 + H281DRAFT_02349 0.41 +2.1 508,349 + H281DRAFT_02349 0.56 +4.1 508,349 + H281DRAFT_02349 0.56 +0.9 508,349 + H281DRAFT_02349 0.56 +0.9 508,350 - H281DRAFT_02349 0.56 +0.4 508,823 + +2.1 508,823 + H281DRAFT_02350 0.48 +0.7 508,823 + H281DRAFT_02350 0.48 -0.1 508,823 + +2.1 508,824 - H281DRAFT_02350 0.49 +0.6 508,824 - H281DRAFT_02350 0.49 +0.5 508,824 - H281DRAFT_02350 0.49 +1.1 508,911 + H281DRAFT_02350 0.70 +0.8 509,143 + H281DRAFT_02351 0.22 +1.2 509,144 - H281DRAFT_02351 0.22 +0.9 509,144 - H281DRAFT_02351 0.22 +0.3 509,620 + +0.4
Or see this region's nucleotide sequence