Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02247 and H281DRAFT_02248 overlap by 4 nucleotides H281DRAFT_02248 and H281DRAFT_02249 are separated by 33 nucleotides H281DRAFT_02249 and H281DRAFT_02250 are separated by 200 nucleotides
H281DRAFT_02247: H281DRAFT_02247 - D-3-phosphoglycerate dehydrogenase, at 395,170 to 396,183
_02247
H281DRAFT_02248: H281DRAFT_02248 - Predicted esterase of the alpha-beta hydrolase superfamily, at 396,180 to 397,043
_02248
H281DRAFT_02249: H281DRAFT_02249 - uncharacterized domain 1-containing protein, at 397,077 to 397,481
_02249
H281DRAFT_02250: H281DRAFT_02250 - tRNA_Lys_CTT, at 397,682 to 397,757
_02250
Position (kb) 396
397
398 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 395.262 kb on + strand at 395.433 kb on + strand, within H281DRAFT_02247 at 395.434 kb on - strand, within H281DRAFT_02247 at 395.536 kb on + strand, within H281DRAFT_02247 at 395.536 kb on + strand, within H281DRAFT_02247 at 395.536 kb on + strand, within H281DRAFT_02247 at 395.537 kb on - strand, within H281DRAFT_02247 at 395.537 kb on - strand, within H281DRAFT_02247 at 395.537 kb on - strand, within H281DRAFT_02247 at 395.544 kb on + strand, within H281DRAFT_02247 at 395.759 kb on - strand, within H281DRAFT_02247 at 395.983 kb on + strand, within H281DRAFT_02247 at 395.984 kb on - strand, within H281DRAFT_02247 at 395.984 kb on - strand, within H281DRAFT_02247 at 395.984 kb on - strand, within H281DRAFT_02247 at 396.011 kb on - strand, within H281DRAFT_02247 at 396.011 kb on - strand, within H281DRAFT_02247 at 396.058 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.076 kb on + strand, within H281DRAFT_02247 at 396.077 kb on - strand, within H281DRAFT_02247 at 396.077 kb on - strand, within H281DRAFT_02247 at 396.085 kb on + strand at 396.085 kb on + strand at 396.086 kb on - strand at 396.181 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.250 kb on + strand at 396.251 kb on - strand at 396.251 kb on - strand at 396.251 kb on - strand at 396.280 kb on + strand, within H281DRAFT_02248 at 396.281 kb on - strand, within H281DRAFT_02248 at 396.322 kb on + strand, within H281DRAFT_02248 at 396.322 kb on + strand, within H281DRAFT_02248 at 396.323 kb on - strand, within H281DRAFT_02248 at 396.374 kb on - strand, within H281DRAFT_02248 at 396.396 kb on + strand, within H281DRAFT_02248 at 396.396 kb on + strand, within H281DRAFT_02248 at 396.397 kb on - strand, within H281DRAFT_02248 at 396.397 kb on - strand, within H281DRAFT_02248 at 396.397 kb on - strand, within H281DRAFT_02248 at 396.397 kb on - strand, within H281DRAFT_02248 at 396.605 kb on + strand, within H281DRAFT_02248 at 396.605 kb on + strand, within H281DRAFT_02248 at 396.605 kb on + strand, within H281DRAFT_02248 at 396.606 kb on - strand, within H281DRAFT_02248 at 396.606 kb on - strand, within H281DRAFT_02248 at 396.606 kb on - strand, within H281DRAFT_02248 at 396.643 kb on + strand, within H281DRAFT_02248 at 396.643 kb on + strand, within H281DRAFT_02248 at 396.643 kb on + strand, within H281DRAFT_02248 at 396.644 kb on - strand, within H281DRAFT_02248 at 396.644 kb on - strand, within H281DRAFT_02248 at 396.754 kb on + strand, within H281DRAFT_02248 at 396.754 kb on + strand, within H281DRAFT_02248 at 396.754 kb on + strand, within H281DRAFT_02248 at 396.754 kb on + strand, within H281DRAFT_02248 at 396.755 kb on - strand, within H281DRAFT_02248 at 396.755 kb on - strand, within H281DRAFT_02248 at 396.755 kb on - strand, within H281DRAFT_02248 at 396.778 kb on + strand, within H281DRAFT_02248 at 396.779 kb on - strand, within H281DRAFT_02248 at 396.779 kb on - strand, within H281DRAFT_02248 at 396.779 kb on - strand, within H281DRAFT_02248 at 396.829 kb on + strand, within H281DRAFT_02248 at 396.830 kb on - strand, within H281DRAFT_02248 at 396.830 kb on - strand, within H281DRAFT_02248 at 396.852 kb on + strand, within H281DRAFT_02248 at 396.865 kb on + strand, within H281DRAFT_02248 at 396.865 kb on + strand, within H281DRAFT_02248 at 396.866 kb on - strand, within H281DRAFT_02248 at 396.866 kb on - strand, within H281DRAFT_02248 at 396.898 kb on + strand, within H281DRAFT_02248 at 396.899 kb on - strand, within H281DRAFT_02248 at 397.057 kb on - strand at 397.057 kb on - strand at 397.079 kb on - strand at 397.094 kb on - strand at 397.094 kb on - strand at 397.094 kb on - strand at 397.094 kb on - strand at 397.213 kb on - strand, within H281DRAFT_02249 at 397.613 kb on + strand at 397.614 kb on - strand at 397.773 kb on + strand at 397.773 kb on + strand at 397.818 kb on + strand at 397.818 kb on + strand at 397.818 kb on + strand at 397.818 kb on + strand at 397.819 kb on - strand at 397.819 kb on - strand at 397.819 kb on - strand at 397.819 kb on - strand at 397.830 kb on - strand at 397.830 kb on - strand at 397.838 kb on + strand at 397.838 kb on + strand at 397.839 kb on - strand at 397.839 kb on - strand at 397.839 kb on - strand at 397.858 kb on + strand at 397.858 kb on + strand at 397.858 kb on + strand at 397.859 kb on - strand at 397.859 kb on - strand at 397.859 kb on - strand at 397.867 kb on - strand at 397.999 kb on - strand at 398.001 kb on + strand at 398.001 kb on + strand at 398.001 kb on + strand at 398.001 kb on + strand at 398.001 kb on + strand at 398.002 kb on - strand at 398.002 kb on - strand at 398.002 kb on - strand at 398.002 kb on - strand at 398.002 kb on - strand at 398.002 kb on - strand at 398.002 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 395,262 + +0.2 395,433 + H281DRAFT_02247 0.26 +0.1 395,434 - H281DRAFT_02247 0.26 -0.9 395,536 + H281DRAFT_02247 0.36 +0.2 395,536 + H281DRAFT_02247 0.36 +0.9 395,536 + H281DRAFT_02247 0.36 -0.3 395,537 - H281DRAFT_02247 0.36 -0.6 395,537 - H281DRAFT_02247 0.36 -0.1 395,537 - H281DRAFT_02247 0.36 +1.0 395,544 + H281DRAFT_02247 0.37 +1.0 395,759 - H281DRAFT_02247 0.58 +1.1 395,983 + H281DRAFT_02247 0.80 -0.3 395,984 - H281DRAFT_02247 0.80 +1.3 395,984 - H281DRAFT_02247 0.80 +0.8 395,984 - H281DRAFT_02247 0.80 +0.5 396,011 - H281DRAFT_02247 0.83 +1.1 396,011 - H281DRAFT_02247 0.83 -0.0 396,058 + H281DRAFT_02247 0.88 -1.4 396,076 + H281DRAFT_02247 0.89 +0.2 396,076 + H281DRAFT_02247 0.89 +1.0 396,076 + H281DRAFT_02247 0.89 +0.2 396,076 + H281DRAFT_02247 0.89 +0.8 396,076 + H281DRAFT_02247 0.89 +3.1 396,076 + H281DRAFT_02247 0.89 +1.3 396,077 - H281DRAFT_02247 0.89 +0.4 396,077 - H281DRAFT_02247 0.89 -0.2 396,085 + +0.6 396,085 + -0.3 396,086 - +0.1 396,181 + +0.4 396,250 + +0.4 396,250 + +0.1 396,250 + +0.3 396,250 + +1.0 396,250 + -0.0 396,250 + -1.7 396,250 + -0.4 396,250 + +0.6 396,251 - +0.3 396,251 - +0.2 396,251 - +0.4 396,280 + H281DRAFT_02248 0.12 -0.4 396,281 - H281DRAFT_02248 0.12 +0.0 396,322 + H281DRAFT_02248 0.16 +0.1 396,322 + H281DRAFT_02248 0.16 -0.1 396,323 - H281DRAFT_02248 0.17 +0.2 396,374 - H281DRAFT_02248 0.22 +0.7 396,396 + H281DRAFT_02248 0.25 -0.0 396,396 + H281DRAFT_02248 0.25 -1.6 396,397 - H281DRAFT_02248 0.25 +0.1 396,397 - H281DRAFT_02248 0.25 +0.2 396,397 - H281DRAFT_02248 0.25 -2.3 396,397 - H281DRAFT_02248 0.25 +0.6 396,605 + H281DRAFT_02248 0.49 -1.3 396,605 + H281DRAFT_02248 0.49 +0.0 396,605 + H281DRAFT_02248 0.49 +0.9 396,606 - H281DRAFT_02248 0.49 -0.2 396,606 - H281DRAFT_02248 0.49 -0.3 396,606 - H281DRAFT_02248 0.49 +0.7 396,643 + H281DRAFT_02248 0.54 +0.2 396,643 + H281DRAFT_02248 0.54 -0.2 396,643 + H281DRAFT_02248 0.54 +0.3 396,644 - H281DRAFT_02248 0.54 +0.1 396,644 - H281DRAFT_02248 0.54 -1.8 396,754 + H281DRAFT_02248 0.66 -0.3 396,754 + H281DRAFT_02248 0.66 +0.2 396,754 + H281DRAFT_02248 0.66 -0.6 396,754 + H281DRAFT_02248 0.66 -0.8 396,755 - H281DRAFT_02248 0.67 -1.0 396,755 - H281DRAFT_02248 0.67 +0.2 396,755 - H281DRAFT_02248 0.67 -1.1 396,778 + H281DRAFT_02248 0.69 +1.3 396,779 - H281DRAFT_02248 0.69 -0.1 396,779 - H281DRAFT_02248 0.69 +0.3 396,779 - H281DRAFT_02248 0.69 -1.2 396,829 + H281DRAFT_02248 0.75 -0.2 396,830 - H281DRAFT_02248 0.75 -0.4 396,830 - H281DRAFT_02248 0.75 -1.5 396,852 + H281DRAFT_02248 0.78 +1.2 396,865 + H281DRAFT_02248 0.79 +1.0 396,865 + H281DRAFT_02248 0.79 -0.1 396,866 - H281DRAFT_02248 0.79 +0.6 396,866 - H281DRAFT_02248 0.79 +0.8 396,898 + H281DRAFT_02248 0.83 -0.9 396,899 - H281DRAFT_02248 0.83 +0.8 397,057 - -0.3 397,057 - -0.6 397,079 - +0.1 397,094 - +1.3 397,094 - -1.0 397,094 - +0.6 397,094 - +0.6 397,213 - H281DRAFT_02249 0.34 -0.7 397,613 + -0.2 397,614 - -0.2 397,773 + +0.7 397,773 + +0.2 397,818 + +1.1 397,818 + +0.4 397,818 + -0.6 397,818 + -0.4 397,819 - +0.5 397,819 - +0.1 397,819 - +1.1 397,819 - +0.1 397,830 - -0.9 397,830 - +0.2 397,838 + +1.0 397,838 + -0.3 397,839 - +0.4 397,839 - -2.2 397,839 - +0.5 397,858 + +0.0 397,858 + -1.4 397,858 + +0.1 397,859 - -1.5 397,859 - +0.5 397,859 - +0.3 397,867 - +0.4 397,999 - -0.3 398,001 + +1.1 398,001 + -0.5 398,001 + -1.5 398,001 + -0.6 398,001 + -0.3 398,002 - -0.7 398,002 - -0.2 398,002 - -1.6 398,002 - -0.1 398,002 - +0.0 398,002 - -0.1 398,002 - +0.3
Or see this region's nucleotide sequence