Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02070 and H281DRAFT_02071 are separated by 161 nucleotides H281DRAFT_02071 and H281DRAFT_02072 are separated by 61 nucleotides
H281DRAFT_02070: H281DRAFT_02070 - fumarylacetoacetate (FAA) hydrolase, at 192,239 to 193,222
_02070
H281DRAFT_02071: H281DRAFT_02071 - transcriptional regulator, IclR family, at 193,384 to 194,301
_02071
H281DRAFT_02072: H281DRAFT_02072 - Protein of unknown function (DUF3108), at 194,363 to 195,637
_02072
Position (kb) 193
194
195 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 192.392 kb on - strand, within H281DRAFT_02070 at 192.882 kb on + strand, within H281DRAFT_02070 at 192.882 kb on + strand, within H281DRAFT_02070 at 192.882 kb on + strand, within H281DRAFT_02070 at 192.883 kb on - strand, within H281DRAFT_02070 at 192.883 kb on - strand, within H281DRAFT_02070 at 192.961 kb on - strand, within H281DRAFT_02070 at 192.961 kb on - strand, within H281DRAFT_02070 at 192.961 kb on - strand, within H281DRAFT_02070 at 193.033 kb on + strand, within H281DRAFT_02070 at 193.089 kb on + strand, within H281DRAFT_02070 at 193.248 kb on + strand at 193.260 kb on - strand at 193.260 kb on - strand at 193.264 kb on + strand at 193.265 kb on - strand at 193.265 kb on - strand at 193.651 kb on + strand, within H281DRAFT_02071 at 193.668 kb on - strand, within H281DRAFT_02071 at 193.673 kb on + strand, within H281DRAFT_02071 at 193.960 kb on + strand, within H281DRAFT_02071 at 194.030 kb on + strand, within H281DRAFT_02071 at 194.030 kb on + strand, within H281DRAFT_02071 at 194.030 kb on + strand, within H281DRAFT_02071 at 194.030 kb on + strand, within H281DRAFT_02071 at 194.030 kb on + strand, within H281DRAFT_02071 at 194.031 kb on - strand, within H281DRAFT_02071 at 194.283 kb on + strand at 194.283 kb on + strand at 194.283 kb on + strand at 194.283 kb on + strand at 194.284 kb on - strand at 194.284 kb on - strand at 194.431 kb on + strand at 194.564 kb on - strand, within H281DRAFT_02072 at 194.575 kb on + strand, within H281DRAFT_02072 at 194.576 kb on - strand, within H281DRAFT_02072 at 194.576 kb on - strand, within H281DRAFT_02072 at 194.870 kb on + strand, within H281DRAFT_02072 at 194.882 kb on + strand, within H281DRAFT_02072 at 194.883 kb on - strand, within H281DRAFT_02072 at 194.965 kb on - strand, within H281DRAFT_02072 at 194.987 kb on + strand, within H281DRAFT_02072 at 194.988 kb on - strand, within H281DRAFT_02072 at 194.988 kb on - strand, within H281DRAFT_02072 at 195.035 kb on + strand, within H281DRAFT_02072 at 195.035 kb on + strand, within H281DRAFT_02072 at 195.036 kb on - strand, within H281DRAFT_02072 at 195.036 kb on - strand, within H281DRAFT_02072 at 195.073 kb on + strand, within H281DRAFT_02072 at 195.074 kb on - strand, within H281DRAFT_02072 at 195.206 kb on + strand, within H281DRAFT_02072 at 195.206 kb on + strand, within H281DRAFT_02072 at 195.206 kb on + strand at 195.207 kb on - strand, within H281DRAFT_02072 at 195.207 kb on - strand, within H281DRAFT_02072 at 195.207 kb on - strand, within H281DRAFT_02072 at 195.277 kb on + strand, within H281DRAFT_02072
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 192,392 - H281DRAFT_02070 0.16 -1.0 192,882 + H281DRAFT_02070 0.65 +0.8 192,882 + H281DRAFT_02070 0.65 -1.0 192,882 + H281DRAFT_02070 0.65 +0.1 192,883 - H281DRAFT_02070 0.65 +0.5 192,883 - H281DRAFT_02070 0.65 +0.3 192,961 - H281DRAFT_02070 0.73 +0.1 192,961 - H281DRAFT_02070 0.73 -0.3 192,961 - H281DRAFT_02070 0.73 -0.6 193,033 + H281DRAFT_02070 0.81 +0.1 193,089 + H281DRAFT_02070 0.86 -1.3 193,248 + +1.2 193,260 - +0.3 193,260 - +1.0 193,264 + -0.3 193,265 - -0.2 193,265 - -0.3 193,651 + H281DRAFT_02071 0.29 +0.4 193,668 - H281DRAFT_02071 0.31 -1.3 193,673 + H281DRAFT_02071 0.31 -0.3 193,960 + H281DRAFT_02071 0.63 -3.0 194,030 + H281DRAFT_02071 0.70 -2.0 194,030 + H281DRAFT_02071 0.70 -0.7 194,030 + H281DRAFT_02071 0.70 -1.6 194,030 + H281DRAFT_02071 0.70 -0.3 194,030 + H281DRAFT_02071 0.70 +0.0 194,031 - H281DRAFT_02071 0.70 -1.6 194,283 + -0.5 194,283 + +0.1 194,283 + +0.4 194,283 + -1.0 194,284 - -0.1 194,284 - -0.2 194,431 + +0.2 194,564 - H281DRAFT_02072 0.16 +0.1 194,575 + H281DRAFT_02072 0.17 +0.4 194,576 - H281DRAFT_02072 0.17 +0.4 194,576 - H281DRAFT_02072 0.17 +0.1 194,870 + H281DRAFT_02072 0.40 +0.2 194,882 + H281DRAFT_02072 0.41 -0.2 194,883 - H281DRAFT_02072 0.41 +0.5 194,965 - H281DRAFT_02072 0.47 -0.6 194,987 + H281DRAFT_02072 0.49 +0.6 194,988 - H281DRAFT_02072 0.49 +0.5 194,988 - H281DRAFT_02072 0.49 -1.3 195,035 + H281DRAFT_02072 0.53 -0.6 195,035 + H281DRAFT_02072 0.53 -0.0 195,036 - H281DRAFT_02072 0.53 -0.1 195,036 - H281DRAFT_02072 0.53 -0.1 195,073 + H281DRAFT_02072 0.56 +0.1 195,074 - H281DRAFT_02072 0.56 -0.6 195,206 + H281DRAFT_02072 0.66 +0.7 195,206 + H281DRAFT_02072 0.66 +0.0 195,206 + +0.5 195,207 - H281DRAFT_02072 0.66 +2.5 195,207 - H281DRAFT_02072 0.66 +0.2 195,207 - H281DRAFT_02072 0.66 -0.4 195,277 + H281DRAFT_02072 0.72 -1.1
Or see this region's nucleotide sequence