Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02063 and H281DRAFT_02064 are separated by 79 nucleotides H281DRAFT_02064 and H281DRAFT_02065 are separated by 122 nucleotides H281DRAFT_02065 and H281DRAFT_02066 are separated by 232 nucleotides
H281DRAFT_02063: H281DRAFT_02063 - type III pantothenate kinase, at 185,501 to 186,343
_02063
H281DRAFT_02064: H281DRAFT_02064 - hypothetical protein, at 186,423 to 186,662
_02064
H281DRAFT_02065: H281DRAFT_02065 - rfaE bifunctional protein, domain II, at 186,785 to 187,267
_02065
H281DRAFT_02066: H281DRAFT_02066 - hypothetical protein, at 187,500 to 188,372
_02066
Position (kb) 186
187
188 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 186.342 kb on - strand at 186.353 kb on + strand at 186.416 kb on + strand at 186.418 kb on + strand at 186.418 kb on + strand at 186.418 kb on + strand at 186.445 kb on + strand at 186.446 kb on - strand at 186.446 kb on - strand at 186.446 kb on - strand at 186.660 kb on + strand at 186.661 kb on - strand at 186.726 kb on - strand at 186.745 kb on + strand at 186.746 kb on - strand at 186.746 kb on - strand at 186.753 kb on - strand at 186.786 kb on + strand at 186.787 kb on - strand at 186.796 kb on + strand at 186.898 kb on + strand, within H281DRAFT_02065 at 186.899 kb on - strand, within H281DRAFT_02065 at 186.899 kb on - strand, within H281DRAFT_02065 at 186.899 kb on - strand, within H281DRAFT_02065 at 186.909 kb on + strand, within H281DRAFT_02065 at 187.140 kb on + strand, within H281DRAFT_02065 at 187.312 kb on - strand at 187.312 kb on - strand at 187.312 kb on - strand at 187.312 kb on - strand at 187.312 kb on - strand at 187.327 kb on + strand at 187.354 kb on - strand at 187.871 kb on - strand, within H281DRAFT_02066 at 187.921 kb on + strand, within H281DRAFT_02066 at 187.970 kb on - strand, within H281DRAFT_02066
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 186,342 - +0.3 186,353 + -0.7 186,416 + -0.2 186,418 + -0.1 186,418 + -0.3 186,418 + +0.0 186,445 + +0.3 186,446 - -0.1 186,446 - -2.0 186,446 - -0.2 186,660 + +0.3 186,661 - -0.0 186,726 - +0.2 186,745 + -2.7 186,746 - +1.7 186,746 - +0.0 186,753 - +0.9 186,786 + +0.3 186,787 - -0.3 186,796 + -0.9 186,898 + H281DRAFT_02065 0.23 +0.1 186,899 - H281DRAFT_02065 0.24 -0.9 186,899 - H281DRAFT_02065 0.24 -2.4 186,899 - H281DRAFT_02065 0.24 -3.4 186,909 + H281DRAFT_02065 0.26 -1.2 187,140 + H281DRAFT_02065 0.73 -0.9 187,312 - -0.3 187,312 - -0.5 187,312 - +0.0 187,312 - -0.3 187,312 - +0.5 187,327 + -1.1 187,354 - -0.3 187,871 - H281DRAFT_02066 0.42 -0.4 187,921 + H281DRAFT_02066 0.48 -0.9 187,970 - H281DRAFT_02066 0.54 -2.4
Or see this region's nucleotide sequence