Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02059 and H281DRAFT_02060 are separated by 25 nucleotides H281DRAFT_02060 and H281DRAFT_02061 overlap by 4 nucleotides
H281DRAFT_02059: H281DRAFT_02059 - phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein, at 181,474 to 182,436
_02059
H281DRAFT_02060: H281DRAFT_02060 - phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein, at 182,462 to 183,340
_02060
H281DRAFT_02061: H281DRAFT_02061 - phospholipid/cholesterol/gamma-HCH transport system permease protein, at 183,337 to 184,506
_02061
Position (kb) 182
183
184 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 181.504 kb on - strand at 181.815 kb on + strand, within H281DRAFT_02059 at 181.815 kb on + strand at 182.194 kb on - strand, within H281DRAFT_02059 at 182.265 kb on + strand, within H281DRAFT_02059 at 182.265 kb on + strand, within H281DRAFT_02059 at 182.265 kb on + strand, within H281DRAFT_02059 at 182.268 kb on - strand, within H281DRAFT_02059 at 182.268 kb on - strand, within H281DRAFT_02059 at 182.299 kb on + strand, within H281DRAFT_02059 at 182.300 kb on - strand, within H281DRAFT_02059 at 182.325 kb on - strand, within H281DRAFT_02059 at 182.398 kb on - strand at 182.398 kb on - strand at 182.449 kb on + strand at 182.450 kb on - strand at 182.571 kb on + strand, within H281DRAFT_02060 at 182.840 kb on + strand, within H281DRAFT_02060 at 183.236 kb on + strand, within H281DRAFT_02060 at 183.236 kb on + strand, within H281DRAFT_02060 at 183.237 kb on - strand, within H281DRAFT_02060 at 183.314 kb on + strand at 183.327 kb on - strand at 183.460 kb on - strand, within H281DRAFT_02061 at 183.575 kb on + strand, within H281DRAFT_02061 at 183.576 kb on - strand, within H281DRAFT_02061 at 183.576 kb on - strand, within H281DRAFT_02061 at 183.576 kb on - strand, within H281DRAFT_02061 at 183.576 kb on - strand, within H281DRAFT_02061 at 183.859 kb on - strand, within H281DRAFT_02061 at 183.869 kb on + strand, within H281DRAFT_02061 at 183.869 kb on + strand, within H281DRAFT_02061 at 183.869 kb on + strand, within H281DRAFT_02061 at 183.870 kb on - strand, within H281DRAFT_02061 at 183.911 kb on + strand, within H281DRAFT_02061 at 183.911 kb on + strand, within H281DRAFT_02061 at 183.912 kb on - strand, within H281DRAFT_02061 at 183.912 kb on - strand at 183.912 kb on - strand, within H281DRAFT_02061 at 183.912 kb on - strand, within H281DRAFT_02061 at 183.980 kb on + strand, within H281DRAFT_02061 at 183.980 kb on + strand, within H281DRAFT_02061 at 183.981 kb on - strand, within H281DRAFT_02061 at 184.065 kb on + strand, within H281DRAFT_02061 at 184.081 kb on + strand, within H281DRAFT_02061 at 184.082 kb on - strand, within H281DRAFT_02061 at 184.082 kb on - strand, within H281DRAFT_02061 at 184.236 kb on + strand, within H281DRAFT_02061 at 184.237 kb on - strand, within H281DRAFT_02061 at 184.237 kb on - strand, within H281DRAFT_02061 at 184.237 kb on - strand, within H281DRAFT_02061 at 184.298 kb on - strand, within H281DRAFT_02061
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 181,504 - -0.2 181,815 + H281DRAFT_02059 0.35 +0.2 181,815 + +2.1 182,194 - H281DRAFT_02059 0.75 -1.1 182,265 + H281DRAFT_02059 0.82 +1.0 182,265 + H281DRAFT_02059 0.82 +0.5 182,265 + H281DRAFT_02059 0.82 -0.9 182,268 - H281DRAFT_02059 0.82 +0.2 182,268 - H281DRAFT_02059 0.82 -0.4 182,299 + H281DRAFT_02059 0.86 +1.3 182,300 - H281DRAFT_02059 0.86 -0.5 182,325 - H281DRAFT_02059 0.88 -0.5 182,398 - +0.6 182,398 - +0.4 182,449 + +1.0 182,450 - -0.1 182,571 + H281DRAFT_02060 0.12 +0.3 182,840 + H281DRAFT_02060 0.43 +1.3 183,236 + H281DRAFT_02060 0.88 +0.3 183,236 + H281DRAFT_02060 0.88 +0.6 183,237 - H281DRAFT_02060 0.88 -0.1 183,314 + -0.1 183,327 - -0.6 183,460 - H281DRAFT_02061 0.11 +0.2 183,575 + H281DRAFT_02061 0.20 -0.1 183,576 - H281DRAFT_02061 0.20 -0.1 183,576 - H281DRAFT_02061 0.20 -0.7 183,576 - H281DRAFT_02061 0.20 +0.4 183,576 - H281DRAFT_02061 0.20 +0.3 183,859 - H281DRAFT_02061 0.45 +0.3 183,869 + H281DRAFT_02061 0.45 +0.6 183,869 + H281DRAFT_02061 0.45 +0.5 183,869 + H281DRAFT_02061 0.45 +0.5 183,870 - H281DRAFT_02061 0.46 -0.3 183,911 + H281DRAFT_02061 0.49 +0.1 183,911 + H281DRAFT_02061 0.49 +0.1 183,912 - H281DRAFT_02061 0.49 +3.0 183,912 - +3.9 183,912 - H281DRAFT_02061 0.49 -0.7 183,912 - H281DRAFT_02061 0.49 +0.5 183,980 + H281DRAFT_02061 0.55 -0.3 183,980 + H281DRAFT_02061 0.55 -0.6 183,981 - H281DRAFT_02061 0.55 -0.2 184,065 + H281DRAFT_02061 0.62 +0.0 184,081 + H281DRAFT_02061 0.64 -0.2 184,082 - H281DRAFT_02061 0.64 -1.2 184,082 - H281DRAFT_02061 0.64 +0.3 184,236 + H281DRAFT_02061 0.77 +0.6 184,237 - H281DRAFT_02061 0.77 +1.5 184,237 - H281DRAFT_02061 0.77 +1.4 184,237 - H281DRAFT_02061 0.77 +0.0 184,298 - H281DRAFT_02061 0.82 +0.8
Or see this region's nucleotide sequence