Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02035 and H281DRAFT_02036 are separated by 247 nucleotides H281DRAFT_02036 and H281DRAFT_02037 are separated by 143 nucleotides H281DRAFT_02037 and H281DRAFT_02038 are separated by 16 nucleotides
H281DRAFT_02035: H281DRAFT_02035 - hypothetical protein, at 156,827 to 157,534
_02035
H281DRAFT_02036: H281DRAFT_02036 - Thiol-disulfide isomerase or thioredoxin, at 157,782 to 158,315
_02036
H281DRAFT_02037: H281DRAFT_02037 - two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family, at 158,459 to 159,811
_02037
H281DRAFT_02038: H281DRAFT_02038 - two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB, at 159,828 to 161,837
_02038
Position (kb) 158
159
160 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 157.524 kb on + strand at 157.525 kb on - strand at 157.695 kb on + strand at 157.695 kb on + strand at 157.695 kb on + strand at 157.695 kb on + strand at 157.695 kb on + strand at 157.695 kb on + strand at 157.696 kb on - strand at 157.696 kb on - strand at 157.696 kb on - strand at 157.696 kb on - strand at 157.700 kb on + strand at 157.709 kb on + strand at 157.833 kb on + strand at 157.974 kb on + strand, within H281DRAFT_02036 at 157.974 kb on + strand, within H281DRAFT_02036 at 157.974 kb on + strand, within H281DRAFT_02036 at 157.974 kb on + strand, within H281DRAFT_02036 at 157.975 kb on - strand, within H281DRAFT_02036 at 157.975 kb on - strand, within H281DRAFT_02036 at 158.006 kb on + strand, within H281DRAFT_02036 at 158.006 kb on + strand, within H281DRAFT_02036 at 158.043 kb on + strand, within H281DRAFT_02036 at 158.043 kb on + strand, within H281DRAFT_02036 at 158.043 kb on + strand, within H281DRAFT_02036 at 158.043 kb on + strand, within H281DRAFT_02036 at 158.045 kb on + strand, within H281DRAFT_02036 at 158.060 kb on + strand, within H281DRAFT_02036 at 158.109 kb on + strand, within H281DRAFT_02036 at 158.109 kb on + strand, within H281DRAFT_02036 at 158.110 kb on - strand, within H281DRAFT_02036 at 158.122 kb on - strand at 158.250 kb on + strand, within H281DRAFT_02036 at 158.359 kb on + strand at 158.360 kb on - strand at 158.365 kb on + strand at 158.366 kb on - strand at 158.793 kb on + strand, within H281DRAFT_02037 at 158.895 kb on + strand, within H281DRAFT_02037 at 159.214 kb on + strand, within H281DRAFT_02037 at 159.253 kb on + strand, within H281DRAFT_02037 at 159.371 kb on - strand, within H281DRAFT_02037 at 159.510 kb on + strand, within H281DRAFT_02037 at 159.548 kb on - strand, within H281DRAFT_02037 at 159.783 kb on + strand at 159.783 kb on + strand at 159.783 kb on + strand at 159.783 kb on + strand at 159.783 kb on + strand at 159.783 kb on + strand at 159.784 kb on - strand at 159.784 kb on - strand at 159.784 kb on - strand at 159.784 kb on - strand at 159.784 kb on - strand at 159.784 kb on - strand at 159.784 kb on - strand at 159.784 kb on - strand at 159.784 kb on - strand at 159.784 kb on - strand at 159.900 kb on + strand at 159.900 kb on + strand at 159.900 kb on + strand at 159.900 kb on + strand at 159.901 kb on - strand at 159.901 kb on - strand at 160.723 kb on - strand, within H281DRAFT_02038 at 160.732 kb on + strand, within H281DRAFT_02038
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 157,524 + +1.0 157,525 - -0.4 157,695 + +3.2 157,695 + +1.0 157,695 + +0.1 157,695 + -0.4 157,695 + +0.8 157,695 + +0.2 157,696 - +0.3 157,696 - +1.7 157,696 - -0.4 157,696 - -1.2 157,700 + -0.8 157,709 + -1.3 157,833 + +1.1 157,974 + H281DRAFT_02036 0.36 +1.1 157,974 + H281DRAFT_02036 0.36 -0.2 157,974 + H281DRAFT_02036 0.36 -0.3 157,974 + H281DRAFT_02036 0.36 -1.5 157,975 - H281DRAFT_02036 0.36 -1.3 157,975 - H281DRAFT_02036 0.36 -0.5 158,006 + H281DRAFT_02036 0.42 -1.5 158,006 + H281DRAFT_02036 0.42 -3.2 158,043 + H281DRAFT_02036 0.49 -1.6 158,043 + H281DRAFT_02036 0.49 -3.0 158,043 + H281DRAFT_02036 0.49 -2.8 158,043 + H281DRAFT_02036 0.49 +0.1 158,045 + H281DRAFT_02036 0.49 -1.5 158,060 + H281DRAFT_02036 0.52 -1.7 158,109 + H281DRAFT_02036 0.61 +1.4 158,109 + H281DRAFT_02036 0.61 -2.7 158,110 - H281DRAFT_02036 0.61 -3.0 158,122 - +0.1 158,250 + H281DRAFT_02036 0.88 -2.5 158,359 + -0.0 158,360 - +0.9 158,365 + +0.7 158,366 - -3.1 158,793 + H281DRAFT_02037 0.25 -3.3 158,895 + H281DRAFT_02037 0.32 +1.2 159,214 + H281DRAFT_02037 0.56 -0.5 159,253 + H281DRAFT_02037 0.59 +0.7 159,371 - H281DRAFT_02037 0.67 -0.8 159,510 + H281DRAFT_02037 0.78 -1.4 159,548 - H281DRAFT_02037 0.80 -0.2 159,783 + -1.3 159,783 + +0.4 159,783 + -0.1 159,783 + +0.5 159,783 + +0.1 159,783 + -0.7 159,784 - -0.2 159,784 - +0.3 159,784 - +0.6 159,784 - +0.9 159,784 - +0.7 159,784 - +0.6 159,784 - +0.3 159,784 - +0.2 159,784 - +1.1 159,784 - +0.4 159,900 + +0.2 159,900 + -0.9 159,900 + +0.3 159,900 + +0.3 159,901 - +0.4 159,901 - -0.3 160,723 - H281DRAFT_02038 0.45 -0.1 160,732 + H281DRAFT_02038 0.45 +0.2
Or see this region's nucleotide sequence