Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02035 and H281DRAFT_02036 are separated by 247 nucleotides H281DRAFT_02036 and H281DRAFT_02037 are separated by 143 nucleotides
H281DRAFT_02035: H281DRAFT_02035 - hypothetical protein, at 156,827 to 157,534
_02035
H281DRAFT_02036: H281DRAFT_02036 - Thiol-disulfide isomerase or thioredoxin, at 157,782 to 158,315
_02036
H281DRAFT_02037: H281DRAFT_02037 - two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family, at 158,459 to 159,811
_02037
Position (kb) 157
158
159 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 156.832 kb on - strand at 156.906 kb on + strand, within H281DRAFT_02035 at 156.906 kb on + strand, within H281DRAFT_02035 at 156.906 kb on + strand, within H281DRAFT_02035 at 156.907 kb on - strand, within H281DRAFT_02035 at 156.907 kb on - strand, within H281DRAFT_02035 at 156.907 kb on - strand, within H281DRAFT_02035 at 156.907 kb on - strand, within H281DRAFT_02035 at 156.939 kb on + strand, within H281DRAFT_02035 at 157.152 kb on - strand, within H281DRAFT_02035 at 157.205 kb on + strand, within H281DRAFT_02035 at 157.205 kb on + strand, within H281DRAFT_02035 at 157.206 kb on - strand, within H281DRAFT_02035 at 157.206 kb on - strand, within H281DRAFT_02035 at 157.206 kb on - strand, within H281DRAFT_02035 at 157.206 kb on - strand, within H281DRAFT_02035 at 157.211 kb on + strand at 157.270 kb on + strand, within H281DRAFT_02035 at 157.399 kb on + strand, within H281DRAFT_02035 at 157.400 kb on - strand, within H281DRAFT_02035 at 157.400 kb on - strand, within H281DRAFT_02035 at 157.524 kb on + strand at 157.525 kb on - strand at 157.695 kb on + strand at 157.695 kb on + strand at 157.695 kb on + strand at 157.695 kb on + strand at 157.695 kb on + strand at 157.695 kb on + strand at 157.696 kb on - strand at 157.696 kb on - strand at 157.696 kb on - strand at 157.696 kb on - strand at 157.700 kb on + strand at 157.709 kb on + strand at 157.833 kb on + strand at 157.974 kb on + strand, within H281DRAFT_02036 at 157.974 kb on + strand, within H281DRAFT_02036 at 157.974 kb on + strand, within H281DRAFT_02036 at 157.974 kb on + strand, within H281DRAFT_02036 at 157.975 kb on - strand, within H281DRAFT_02036 at 157.975 kb on - strand, within H281DRAFT_02036 at 158.006 kb on + strand, within H281DRAFT_02036 at 158.006 kb on + strand, within H281DRAFT_02036 at 158.043 kb on + strand, within H281DRAFT_02036 at 158.043 kb on + strand, within H281DRAFT_02036 at 158.043 kb on + strand, within H281DRAFT_02036 at 158.043 kb on + strand, within H281DRAFT_02036 at 158.045 kb on + strand, within H281DRAFT_02036 at 158.060 kb on + strand, within H281DRAFT_02036 at 158.109 kb on + strand, within H281DRAFT_02036 at 158.109 kb on + strand, within H281DRAFT_02036 at 158.110 kb on - strand, within H281DRAFT_02036 at 158.122 kb on - strand at 158.250 kb on + strand, within H281DRAFT_02036 at 158.359 kb on + strand at 158.360 kb on - strand at 158.365 kb on + strand at 158.366 kb on - strand at 158.793 kb on + strand, within H281DRAFT_02037 at 158.895 kb on + strand, within H281DRAFT_02037 at 159.214 kb on + strand, within H281DRAFT_02037 at 159.253 kb on + strand, within H281DRAFT_02037
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 156,832 - +0.2 156,906 + H281DRAFT_02035 0.11 -0.5 156,906 + H281DRAFT_02035 0.11 +0.1 156,906 + H281DRAFT_02035 0.11 +0.7 156,907 - H281DRAFT_02035 0.11 +0.7 156,907 - H281DRAFT_02035 0.11 +0.6 156,907 - H281DRAFT_02035 0.11 -0.5 156,907 - H281DRAFT_02035 0.11 +0.2 156,939 + H281DRAFT_02035 0.16 +0.7 157,152 - H281DRAFT_02035 0.46 +0.2 157,205 + H281DRAFT_02035 0.53 +0.5 157,205 + H281DRAFT_02035 0.53 +0.7 157,206 - H281DRAFT_02035 0.54 +0.8 157,206 - H281DRAFT_02035 0.54 -0.6 157,206 - H281DRAFT_02035 0.54 +0.8 157,206 - H281DRAFT_02035 0.54 +1.9 157,211 + +2.3 157,270 + H281DRAFT_02035 0.63 +0.5 157,399 + H281DRAFT_02035 0.81 +1.1 157,400 - H281DRAFT_02035 0.81 -1.6 157,400 - H281DRAFT_02035 0.81 +0.2 157,524 + +1.0 157,525 - -0.4 157,695 + +3.2 157,695 + +1.0 157,695 + +0.1 157,695 + -0.4 157,695 + +0.8 157,695 + +0.2 157,696 - +0.3 157,696 - +1.7 157,696 - -0.4 157,696 - -1.2 157,700 + -0.8 157,709 + -1.3 157,833 + +1.1 157,974 + H281DRAFT_02036 0.36 +1.1 157,974 + H281DRAFT_02036 0.36 -0.2 157,974 + H281DRAFT_02036 0.36 -0.3 157,974 + H281DRAFT_02036 0.36 -1.5 157,975 - H281DRAFT_02036 0.36 -1.3 157,975 - H281DRAFT_02036 0.36 -0.5 158,006 + H281DRAFT_02036 0.42 -1.5 158,006 + H281DRAFT_02036 0.42 -3.2 158,043 + H281DRAFT_02036 0.49 -1.6 158,043 + H281DRAFT_02036 0.49 -3.0 158,043 + H281DRAFT_02036 0.49 -2.8 158,043 + H281DRAFT_02036 0.49 +0.1 158,045 + H281DRAFT_02036 0.49 -1.5 158,060 + H281DRAFT_02036 0.52 -1.7 158,109 + H281DRAFT_02036 0.61 +1.4 158,109 + H281DRAFT_02036 0.61 -2.7 158,110 - H281DRAFT_02036 0.61 -3.0 158,122 - +0.1 158,250 + H281DRAFT_02036 0.88 -2.5 158,359 + -0.0 158,360 - +0.9 158,365 + +0.7 158,366 - -3.1 158,793 + H281DRAFT_02037 0.25 -3.3 158,895 + H281DRAFT_02037 0.32 +1.2 159,214 + H281DRAFT_02037 0.56 -0.5 159,253 + H281DRAFT_02037 0.59 +0.7
Or see this region's nucleotide sequence