Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01991 and H281DRAFT_01992 are separated by 31 nucleotides H281DRAFT_01992 and H281DRAFT_01993 are separated by 291 nucleotides H281DRAFT_01993 and H281DRAFT_01994 are separated by 43 nucleotides
H281DRAFT_01991: H281DRAFT_01991 - Protein of unknown function (DUF2970), at 109,580 to 109,789
_01991
H281DRAFT_01992: H281DRAFT_01992 - cytochrome c oxidase assembly protein subunit 11, at 109,821 to 110,435
_01992
H281DRAFT_01993: H281DRAFT_01993 - cytochrome c oxidase subunit 1, at 110,727 to 112,340
_01993
H281DRAFT_01994: H281DRAFT_01994 - cytochrome c oxidase subunit 2, at 112,384 to 114,018
_01994
Position (kb)
110
111
112
113 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 109.916 kb on - strand, within H281DRAFT_01992 at 110.015 kb on + strand, within H281DRAFT_01992 at 110.044 kb on + strand, within H281DRAFT_01992 at 110.045 kb on - strand, within H281DRAFT_01992 at 110.045 kb on - strand, within H281DRAFT_01992 at 110.069 kb on - strand, within H281DRAFT_01992 at 110.069 kb on - strand, within H281DRAFT_01992 at 110.069 kb on - strand, within H281DRAFT_01992 at 110.122 kb on + strand, within H281DRAFT_01992 at 110.122 kb on + strand, within H281DRAFT_01992 at 110.123 kb on - strand, within H281DRAFT_01992 at 110.123 kb on - strand, within H281DRAFT_01992 at 110.123 kb on - strand, within H281DRAFT_01992 at 110.123 kb on - strand, within H281DRAFT_01992 at 110.123 kb on - strand, within H281DRAFT_01992 at 110.123 kb on - strand, within H281DRAFT_01992 at 110.123 kb on - strand, within H281DRAFT_01992 at 110.246 kb on + strand, within H281DRAFT_01992 at 110.247 kb on - strand, within H281DRAFT_01992 at 110.320 kb on + strand, within H281DRAFT_01992 at 110.321 kb on - strand, within H281DRAFT_01992 at 110.461 kb on + strand at 110.462 kb on - strand at 110.462 kb on - strand at 110.718 kb on - strand at 110.729 kb on - strand at 110.881 kb on + strand at 110.881 kb on + strand at 110.881 kb on + strand at 110.882 kb on - strand at 111.067 kb on + strand, within H281DRAFT_01993 at 111.067 kb on + strand, within H281DRAFT_01993 at 111.067 kb on + strand, within H281DRAFT_01993 at 111.067 kb on + strand, within H281DRAFT_01993 at 111.068 kb on - strand, within H281DRAFT_01993 at 111.097 kb on + strand, within H281DRAFT_01993 at 111.100 kb on + strand, within H281DRAFT_01993 at 111.100 kb on + strand, within H281DRAFT_01993 at 111.145 kb on + strand at 111.146 kb on - strand, within H281DRAFT_01993 at 111.146 kb on - strand, within H281DRAFT_01993 at 111.169 kb on + strand, within H281DRAFT_01993 at 111.170 kb on - strand, within H281DRAFT_01993 at 111.170 kb on - strand, within H281DRAFT_01993 at 111.174 kb on - strand, within H281DRAFT_01993 at 111.305 kb on + strand, within H281DRAFT_01993 at 111.361 kb on + strand, within H281DRAFT_01993 at 111.470 kb on + strand, within H281DRAFT_01993 at 111.471 kb on - strand, within H281DRAFT_01993 at 111.547 kb on + strand, within H281DRAFT_01993 at 111.547 kb on + strand, within H281DRAFT_01993 at 111.547 kb on + strand, within H281DRAFT_01993 at 111.548 kb on - strand, within H281DRAFT_01993 at 111.578 kb on + strand, within H281DRAFT_01993 at 111.579 kb on - strand, within H281DRAFT_01993 at 111.579 kb on - strand, within H281DRAFT_01993 at 111.579 kb on - strand, within H281DRAFT_01993 at 111.586 kb on + strand, within H281DRAFT_01993 at 111.587 kb on - strand, within H281DRAFT_01993 at 111.701 kb on - strand, within H281DRAFT_01993 at 111.883 kb on + strand, within H281DRAFT_01993 at 111.883 kb on + strand, within H281DRAFT_01993 at 111.884 kb on - strand, within H281DRAFT_01993 at 112.213 kb on + strand at 112.214 kb on - strand at 112.220 kb on + strand at 112.335 kb on - strand at 112.361 kb on - strand at 112.465 kb on - strand at 112.468 kb on - strand at 112.468 kb on - strand at 112.468 kb on - strand at 112.468 kb on - strand at 112.679 kb on + strand, within H281DRAFT_01994 at 112.909 kb on - strand, within H281DRAFT_01994 at 112.940 kb on - strand, within H281DRAFT_01994 at 112.953 kb on + strand, within H281DRAFT_01994 at 112.953 kb on + strand, within H281DRAFT_01994 at 112.953 kb on + strand, within H281DRAFT_01994 at 112.954 kb on - strand, within H281DRAFT_01994 at 112.954 kb on - strand, within H281DRAFT_01994 at 113.105 kb on + strand, within H281DRAFT_01994 at 113.105 kb on + strand, within H281DRAFT_01994 at 113.105 kb on + strand, within H281DRAFT_01994 at 113.106 kb on - strand, within H281DRAFT_01994 at 113.142 kb on + strand, within H281DRAFT_01994 at 113.142 kb on + strand, within H281DRAFT_01994 at 113.142 kb on + strand, within H281DRAFT_01994 at 113.143 kb on - strand, within H281DRAFT_01994 at 113.143 kb on - strand, within H281DRAFT_01994 at 113.143 kb on - strand, within H281DRAFT_01994 at 113.144 kb on + strand, within H281DRAFT_01994 at 113.145 kb on - strand, within H281DRAFT_01994
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 109,916 - H281DRAFT_01992 0.15 -0.4 110,015 + H281DRAFT_01992 0.32 -0.1 110,044 + H281DRAFT_01992 0.36 -0.4 110,045 - H281DRAFT_01992 0.36 +0.4 110,045 - H281DRAFT_01992 0.36 +0.5 110,069 - H281DRAFT_01992 0.40 -0.6 110,069 - H281DRAFT_01992 0.40 +0.5 110,069 - H281DRAFT_01992 0.40 -1.1 110,122 + H281DRAFT_01992 0.49 -2.3 110,122 + H281DRAFT_01992 0.49 -2.9 110,123 - H281DRAFT_01992 0.49 +0.2 110,123 - H281DRAFT_01992 0.49 -0.8 110,123 - H281DRAFT_01992 0.49 -0.8 110,123 - H281DRAFT_01992 0.49 +1.1 110,123 - H281DRAFT_01992 0.49 +0.3 110,123 - H281DRAFT_01992 0.49 +1.7 110,123 - H281DRAFT_01992 0.49 +0.5 110,246 + H281DRAFT_01992 0.69 -0.9 110,247 - H281DRAFT_01992 0.69 -1.9 110,320 + H281DRAFT_01992 0.81 -1.0 110,321 - H281DRAFT_01992 0.81 +0.2 110,461 + -2.4 110,462 - -0.3 110,462 - -0.0 110,718 - +1.4 110,729 - -0.3 110,881 + +1.1 110,881 + -0.9 110,881 + -0.1 110,882 - -3.0 111,067 + H281DRAFT_01993 0.21 -1.9 111,067 + H281DRAFT_01993 0.21 -2.8 111,067 + H281DRAFT_01993 0.21 -3.5 111,067 + H281DRAFT_01993 0.21 -1.3 111,068 - H281DRAFT_01993 0.21 -1.6 111,097 + H281DRAFT_01993 0.23 -2.1 111,100 + H281DRAFT_01993 0.23 +1.2 111,100 + H281DRAFT_01993 0.23 -1.2 111,145 + +0.1 111,146 - H281DRAFT_01993 0.26 -1.3 111,146 - H281DRAFT_01993 0.26 -1.3 111,169 + H281DRAFT_01993 0.27 +4.1 111,170 - H281DRAFT_01993 0.27 -3.2 111,170 - H281DRAFT_01993 0.27 -2.8 111,174 - H281DRAFT_01993 0.28 -1.0 111,305 + H281DRAFT_01993 0.36 -1.9 111,361 + H281DRAFT_01993 0.39 -1.4 111,470 + H281DRAFT_01993 0.46 -0.6 111,471 - H281DRAFT_01993 0.46 -1.7 111,547 + H281DRAFT_01993 0.51 -1.9 111,547 + H281DRAFT_01993 0.51 -1.9 111,547 + H281DRAFT_01993 0.51 -1.0 111,548 - H281DRAFT_01993 0.51 -3.0 111,578 + H281DRAFT_01993 0.53 +0.2 111,579 - H281DRAFT_01993 0.53 -0.9 111,579 - H281DRAFT_01993 0.53 -1.3 111,579 - H281DRAFT_01993 0.53 -0.4 111,586 + H281DRAFT_01993 0.53 -1.3 111,587 - H281DRAFT_01993 0.53 -3.0 111,701 - H281DRAFT_01993 0.60 -3.9 111,883 + H281DRAFT_01993 0.72 +0.5 111,883 + H281DRAFT_01993 0.72 +0.5 111,884 - H281DRAFT_01993 0.72 -0.5 112,213 + -1.7 112,214 - -0.5 112,220 + -0.9 112,335 - -2.6 112,361 - +0.7 112,465 - +0.0 112,468 - +0.7 112,468 - +0.5 112,468 - -0.1 112,468 - -0.1 112,679 + H281DRAFT_01994 0.18 -1.6 112,909 - H281DRAFT_01994 0.32 +1.4 112,940 - H281DRAFT_01994 0.34 +0.4 112,953 + H281DRAFT_01994 0.35 -2.7 112,953 + H281DRAFT_01994 0.35 -1.6 112,953 + H281DRAFT_01994 0.35 -2.4 112,954 - H281DRAFT_01994 0.35 +1.3 112,954 - H281DRAFT_01994 0.35 +0.7 113,105 + H281DRAFT_01994 0.44 -0.1 113,105 + H281DRAFT_01994 0.44 -1.1 113,105 + H281DRAFT_01994 0.44 -0.1 113,106 - H281DRAFT_01994 0.44 -0.3 113,142 + H281DRAFT_01994 0.46 -0.7 113,142 + H281DRAFT_01994 0.46 -0.5 113,142 + H281DRAFT_01994 0.46 +1.6 113,143 - H281DRAFT_01994 0.46 +1.1 113,143 - H281DRAFT_01994 0.46 +1.5 113,143 - H281DRAFT_01994 0.46 -0.1 113,144 + H281DRAFT_01994 0.46 -1.1 113,145 - H281DRAFT_01994 0.47 -0.4
Or see this region's nucleotide sequence