Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01910 and H281DRAFT_01911 are separated by 67 nucleotides H281DRAFT_01911 and H281DRAFT_01912 are separated by 168 nucleotides H281DRAFT_01912 and H281DRAFT_01913 are separated by 320 nucleotides
H281DRAFT_01910: H281DRAFT_01910 - hypothetical protein, at 23,895 to 24,695
_01910
H281DRAFT_01911: H281DRAFT_01911 - single-strand binding protein, at 24,763 to 25,302
_01911
H281DRAFT_01912: H281DRAFT_01912 - Predicted arabinose efflux permease, MFS family, at 25,471 to 26,736
_01912
H281DRAFT_01913: H281DRAFT_01913 - Excinuclease ABC subunit A, at 27,057 to 29,930
_01913
Position (kb) 25
26
27 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 24.514 kb on + strand, within H281DRAFT_01910 at 24.603 kb on + strand, within H281DRAFT_01910 at 24.603 kb on + strand, within H281DRAFT_01910 at 24.604 kb on - strand, within H281DRAFT_01910 at 24.604 kb on - strand, within H281DRAFT_01910 at 24.604 kb on - strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.607 kb on + strand, within H281DRAFT_01910 at 24.608 kb on - strand, within H281DRAFT_01910 at 24.608 kb on - strand, within H281DRAFT_01910 at 24.608 kb on - strand, within H281DRAFT_01910 at 24.608 kb on - strand, within H281DRAFT_01910 at 24.623 kb on + strand at 24.623 kb on + strand at 24.624 kb on - strand at 24.624 kb on - strand at 24.624 kb on - strand at 25.446 kb on - strand at 25.446 kb on - strand at 25.518 kb on + strand at 25.519 kb on - strand at 25.908 kb on - strand, within H281DRAFT_01912 at 26.478 kb on - strand, within H281DRAFT_01912 at 26.931 kb on + strand at 26.931 kb on + strand at 26.932 kb on - strand at 26.932 kb on - strand at 26.932 kb on - strand at 26.932 kb on - strand at 27.006 kb on - strand at 27.008 kb on - strand at 27.008 kb on - strand at 27.008 kb on - strand at 27.008 kb on - strand at 27.008 kb on - strand at 27.008 kb on - strand at 27.010 kb on + strand at 27.050 kb on + strand at 27.051 kb on - strand at 27.072 kb on - strand at 27.118 kb on + strand at 27.118 kb on + strand at 27.118 kb on + strand at 27.119 kb on - strand at 27.139 kb on + strand at 27.140 kb on - strand at 27.140 kb on - strand at 27.213 kb on + strand at 27.214 kb on - strand at 27.234 kb on + strand at 27.234 kb on + strand at 27.235 kb on - strand at 27.385 kb on + strand, within H281DRAFT_01913 at 27.411 kb on + strand, within H281DRAFT_01913 at 27.411 kb on + strand, within H281DRAFT_01913 at 27.411 kb on + strand, within H281DRAFT_01913 at 27.636 kb on + strand, within H281DRAFT_01913 at 27.636 kb on + strand, within H281DRAFT_01913 at 27.636 kb on + strand, within H281DRAFT_01913 at 27.637 kb on - strand, within H281DRAFT_01913 at 27.684 kb on - strand, within H281DRAFT_01913
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 24,514 + H281DRAFT_01910 0.77 +0.7 24,603 + H281DRAFT_01910 0.88 +0.2 24,603 + H281DRAFT_01910 0.88 +0.5 24,604 - H281DRAFT_01910 0.89 -0.5 24,604 - H281DRAFT_01910 0.89 -0.7 24,604 - H281DRAFT_01910 0.89 -0.5 24,607 + H281DRAFT_01910 0.89 +0.1 24,607 + H281DRAFT_01910 0.89 -0.3 24,607 + H281DRAFT_01910 0.89 -0.5 24,607 + H281DRAFT_01910 0.89 +0.8 24,607 + H281DRAFT_01910 0.89 +0.2 24,607 + H281DRAFT_01910 0.89 -1.2 24,608 - H281DRAFT_01910 0.89 +0.1 24,608 - H281DRAFT_01910 0.89 -0.6 24,608 - H281DRAFT_01910 0.89 +0.3 24,608 - H281DRAFT_01910 0.89 +0.1 24,623 + +0.6 24,623 + -0.3 24,624 - -0.2 24,624 - -0.4 24,624 - -0.8 25,446 - -0.0 25,446 - +1.5 25,518 + +1.3 25,519 - +2.1 25,908 - H281DRAFT_01912 0.35 +3.9 26,478 - H281DRAFT_01912 0.80 +2.1 26,931 + +1.7 26,931 + +2.5 26,932 - -0.0 26,932 - +0.7 26,932 - -1.4 26,932 - -0.9 27,006 - +0.2 27,008 - +0.0 27,008 - -0.7 27,008 - -0.1 27,008 - +3.4 27,008 - -0.8 27,008 - +0.1 27,010 + -0.3 27,050 + +1.6 27,051 - +0.6 27,072 - +0.9 27,118 + -0.2 27,118 + -0.1 27,118 + -1.2 27,119 - -0.8 27,139 + -0.1 27,140 - -0.1 27,140 - -2.6 27,213 + -0.1 27,214 - -2.7 27,234 + -1.1 27,234 + -1.2 27,235 - -0.5 27,385 + H281DRAFT_01913 0.11 +0.2 27,411 + H281DRAFT_01913 0.12 -0.2 27,411 + H281DRAFT_01913 0.12 -0.7 27,411 + H281DRAFT_01913 0.12 -0.9 27,636 + H281DRAFT_01913 0.20 -0.1 27,636 + H281DRAFT_01913 0.20 +0.3 27,636 + H281DRAFT_01913 0.20 -1.3 27,637 - H281DRAFT_01913 0.20 +0.2 27,684 - H281DRAFT_01913 0.22 -0.5
Or see this region's nucleotide sequence