Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01810 and H281DRAFT_01811 are separated by 103 nucleotides H281DRAFT_01811 and H281DRAFT_01812 are separated by 100 nucleotides H281DRAFT_01812 and H281DRAFT_01813 are separated by 102 nucleotides
H281DRAFT_01810: H281DRAFT_01810 - transcriptional regulator, LysR family, at 711,515 to 712,483
_01810
H281DRAFT_01811: H281DRAFT_01811 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 712,587 to 713,363
_01811
H281DRAFT_01812: H281DRAFT_01812 - Short-chain dehydrogenase, at 713,464 to 714,213
_01812
H281DRAFT_01813: H281DRAFT_01813 - transcriptional regulator, AraC family, at 714,316 to 715,236
_01813
Position (kb) 713
714
715 Strain fitness (log2 ratio) -1
0
1
2 at 712.936 kb on - strand, within H281DRAFT_01811 at 712.936 kb on - strand, within H281DRAFT_01811 at 713.593 kb on - strand, within H281DRAFT_01812 at 713.947 kb on + strand, within H281DRAFT_01812 at 714.198 kb on + strand at 714.253 kb on + strand at 714.254 kb on - strand at 714.433 kb on + strand, within H281DRAFT_01813 at 714.434 kb on - strand, within H281DRAFT_01813 at 715.045 kb on + strand, within H281DRAFT_01813
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 712,936 - H281DRAFT_01811 0.45 -0.2 712,936 - H281DRAFT_01811 0.45 +0.2 713,593 - H281DRAFT_01812 0.17 +0.1 713,947 + H281DRAFT_01812 0.64 +1.4 714,198 + +0.3 714,253 + -1.0 714,254 - -0.0 714,433 + H281DRAFT_01813 0.13 -0.4 714,434 - H281DRAFT_01813 0.13 -0.7 715,045 + H281DRAFT_01813 0.79 +1.9
Or see this region's nucleotide sequence