Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01801 and H281DRAFT_01802 are separated by 30 nucleotides H281DRAFT_01802 and H281DRAFT_01803 are separated by 144 nucleotides H281DRAFT_01803 and H281DRAFT_01804 are separated by 165 nucleotides
H281DRAFT_01801: H281DRAFT_01801 - Predicted arabinose efflux permease, MFS family, at 701,565 to 702,827
_01801
H281DRAFT_01802: H281DRAFT_01802 - Pimeloyl-ACP methyl ester carboxylesterase, at 702,858 to 703,739
_01802
H281DRAFT_01803: H281DRAFT_01803 - transcriptional regulator, HxlR family, at 703,884 to 704,339
_01803
H281DRAFT_01804: H281DRAFT_01804 - Predicted arabinose efflux permease, MFS family, at 704,505 to 705,749
_01804
Position (kb) 702
703
704 Strain fitness (log2 ratio) -1
0
1 at 702.075 kb on + strand, within H281DRAFT_01801 at 702.076 kb on - strand, within H281DRAFT_01801 at 702.079 kb on - strand, within H281DRAFT_01801 at 702.158 kb on + strand, within H281DRAFT_01801 at 702.159 kb on - strand, within H281DRAFT_01801 at 702.511 kb on + strand, within H281DRAFT_01801 at 702.876 kb on - strand at 703.090 kb on - strand, within H281DRAFT_01802 at 703.162 kb on + strand, within H281DRAFT_01802 at 703.163 kb on - strand, within H281DRAFT_01802 at 703.408 kb on - strand, within H281DRAFT_01802 at 703.513 kb on - strand, within H281DRAFT_01802 at 703.576 kb on - strand, within H281DRAFT_01802 at 703.576 kb on - strand, within H281DRAFT_01802 at 703.611 kb on + strand, within H281DRAFT_01802 at 703.808 kb on - strand at 703.873 kb on - strand at 703.873 kb on - strand at 703.885 kb on + strand at 703.886 kb on - strand at 703.886 kb on - strand at 703.953 kb on + strand, within H281DRAFT_01803 at 703.964 kb on + strand, within H281DRAFT_01803 at 704.099 kb on - strand, within H281DRAFT_01803 at 704.099 kb on - strand, within H281DRAFT_01803 at 704.181 kb on + strand, within H281DRAFT_01803 at 704.637 kb on + strand, within H281DRAFT_01804
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 702,075 + H281DRAFT_01801 0.40 +1.0 702,076 - H281DRAFT_01801 0.40 +0.7 702,079 - H281DRAFT_01801 0.41 +0.3 702,158 + H281DRAFT_01801 0.47 +0.5 702,159 - H281DRAFT_01801 0.47 -0.0 702,511 + H281DRAFT_01801 0.75 -0.2 702,876 - -0.2 703,090 - H281DRAFT_01802 0.26 -0.1 703,162 + H281DRAFT_01802 0.34 +1.0 703,163 - H281DRAFT_01802 0.35 -0.0 703,408 - H281DRAFT_01802 0.62 -0.4 703,513 - H281DRAFT_01802 0.74 -0.2 703,576 - H281DRAFT_01802 0.81 +0.5 703,576 - H281DRAFT_01802 0.81 -0.3 703,611 + H281DRAFT_01802 0.85 -0.2 703,808 - -0.1 703,873 - -1.3 703,873 - +1.1 703,885 + -0.6 703,886 - +1.0 703,886 - -0.3 703,953 + H281DRAFT_01803 0.15 -0.7 703,964 + H281DRAFT_01803 0.18 -0.2 704,099 - H281DRAFT_01803 0.47 -0.4 704,099 - H281DRAFT_01803 0.47 -0.8 704,181 + H281DRAFT_01803 0.65 -1.2 704,637 + H281DRAFT_01804 0.11 -0.9
Or see this region's nucleotide sequence